Source: BEFREE ×
Variant Gene N. diseases v DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs12425791
rs12425791 		4 0.882 0.120 12 674318 downstream gene variant G/A;C snv 0.890 0.900 9 2009 2016
dbSNP: rs2107595
rs2107595 		13 0.732 0.280 7 19009765 regulatory region variant G/A snv 0.19 0.850 1.000 5 2012 2019
dbSNP: rs11984041
rs11984041
HDAC9
2 0.925 0.080 7 18992312 intron variant C/T snv 0.13 0.830 1.000 3 2012 2015
dbSNP: rs2200733
rs2200733 		11 0.752 0.240 4 110789013 intergenic variant C/T snv 0.18 0.820 1.000 2 2008 2013
dbSNP: rs556621
rs556621 		2 1.000 6 44626422 intergenic variant T/G snv 0.73 0.820 1.000 2 2012 2017
dbSNP: rs1799963
rs1799963
F2
18 0.695 0.400 11 46739505 3 prime UTR variant G/A snv 9.6E-03 0.810 1.000 1 2001 2016
dbSNP: rs1799983
rs1799983
NOS3
246 0.430 0.880 7 150999023 missense variant T/A;G snv 0.75 0.780 0.875 8 2007 2018
dbSNP: rs12204590
rs12204590
LINC01394 ; LOC112267978
3 1.000 0.080 6 1337158 intergenic variant T/A snv 0.14 0.720 1.000 2 2016 2017
dbSNP: rs1333049
rs1333049
CDKN2B-AS1
44 0.614 0.520 9 22125504 intron variant G/C snv 0.41 0.720 1.000 2 2009 2016
dbSNP: rs2230500
rs2230500
PRKCH
4 0.925 0.080 14 61457521 missense variant G/A snv 3.1E-02 1.6E-02 0.720 1.000 2 2007 2014
dbSNP: rs1122608
rs1122608
SMARCA4
12 0.763 0.120 19 11052925 intron variant G/T snv 0.18 0.710 1.000 1 2014 2014
dbSNP: rs4471613
rs4471613
ALDH1A2
2 1.000 0.080 15 58259495 intron variant G/A snv 4.3E-02 0.710 1.000 1 2015 2015
dbSNP: rs720470
rs720470
LOC105372798
1 21 37561586 intergenic variant T/C snv 0.28 0.710 1.000 1 2018 2018
dbSNP: rs72653706
rs72653706
ABCC6
14 0.695 0.480 16 16163078 stop gained G/A snv 1.4E-03 1.2E-03 0.710 1.000 1 2010 2010
dbSNP: rs780094
rs780094
GCKR
27 0.658 0.400 2 27518370 intron variant T/C snv 0.67 0.710 1.000 1 2010 2016
dbSNP: rs880315
rs880315
CASZ1
1 0.925 0.120 1 10736809 intron variant T/C snv 0.32 0.710 1.000 1 2017 2018
dbSNP: rs9521634
rs9521634
COL4A1
1 13 110181552 intron variant T/A;C snv 0.710 1.000 1 2018 2018
dbSNP: rs9797861
rs9797861
SLC44A2
6 0.790 0.200 19 10632450 intron variant C/A;G;T snv 0.710 1.000 1 2016 2016
dbSNP: rs9939609
rs9939609
FTO
80 0.559 0.720 16 53786615 intron variant T/A snv 0.41 0.710 1.000 1 2013 2016
dbSNP: rs1217691063
rs1217691063
MTHFR
614 0.330 0.920 1 11796309 missense variant A/G snv 4.0E-06 7.0E-06 0.100 0.914 58 1998 2018
dbSNP: rs6265
rs6265
BDNF ; BDNF-AS
264 0.436 0.760 11 27658369 missense variant C/T snv 0.19 0.15 0.100 0.789 19 2008 2019
dbSNP: rs759834365
rs759834365
BDNF ; BDNF-AS
237 0.448 0.760 11 27658456 missense variant C/T snv 1.2E-05 0.100 0.789 19 2008 2019
dbSNP: rs11833579
rs11833579 		6 0.827 0.200 12 666033 upstream gene variant G/A snv 0.25 0.100 0.727 11 2010 2019
dbSNP: rs397507444
rs397507444
MTHFR
306 0.405 0.880 1 11794407 missense variant T/G snv 0.080 1.000 8 2006 2018
dbSNP: rs662
rs662
PON1
153 0.485 0.840 7 95308134 missense variant T/C snv 0.38 0.42 0.060 0.833 6 2005 2016