Source: ALL
Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs121908120
rs121908120
A 0.700 CausalMutation CLINVAR

dbSNP: rs180177035
rs180177035
C 0.700 CausalMutation CLINVAR

dbSNP: rs587781245
rs587781245
A 0.700 GeneticVariation CLINVAR

dbSNP: rs104894226
rs104894226
T 0.700 CausalMutation CLINVAR Germline mutations in HRAS proto-oncogene cause Costello syndrome. 16170316

2005

dbSNP: rs2476601
rs2476601
0.040 GeneticVariation BEFREE These results suggest that the non-synonymous C1858T substitution in the PTPN22 gene may have an influence on the severity of alopecia areata and provide further evidence for autoimmunity as an aetiological factor in this disorder. 16829308

2006

dbSNP: rs1800520
rs1800520
0.010 GeneticVariation BEFREE Investigation of the p.Ser278Arg polymorphism of the autoimmune regulator (AIRE) gene in alopecia areata. 16774540

2006

dbSNP: rs9282858
rs9282858
0.710 GeneticVariation BEFREE Our study provides evidence that the SRD5A2 A49T A variant is associated with an increased risk of prostate cancer, lower levels of circulating 3alpha-diolG and decreased risk of baldness. 17136762

2007

dbSNP: rs6152
rs6152
AR
0.010 GeneticVariation BEFREE We utilised statistical methods appropriate for the categorical nature of the phenotype and familial structure of the cohort, and determined that whilst SNP rs6152 was strongly associated with baldness (P < 0.0001), the GGN triplet repeat was not (P = 0.13). 17256155

2007

dbSNP: rs2476601
rs2476601
0.040 GeneticVariation BEFREE The R620W polymorphism in PTPN22 confers general susceptibility for the development of alopecia areata. 18028494

2008

dbSNP: rs1217691063
rs1217691063
0.020 GeneticVariation BEFREE Of these, only the MTHFR 677 C --> T SNP was associated with alopecia, and only in African Americans (p = 0.032). 18381794

2008

dbSNP: rs1382048442
rs1382048442
0.010 GeneticVariation BEFREE Of these, only the MTHFR 677 C --> T SNP was associated with alopecia, and only in African Americans (p = 0.032). 18381794

2008

dbSNP: rs199473704
rs199473704
0.010 GeneticVariation BEFREE We conclude that the G573S and G573C substitutions render the TRPV3 channel spontaneously active under normal physiological conditions, which in turn alters ion homeostasis and membrane potentials of skin keratinocytes, leading to hair loss and dermatitis-like skin diseases. 17706768

2008

dbSNP: rs111238176
rs111238176
0.010 GeneticVariation BEFREE In a hospital-based case-control study of 84 patients with alopecia areata and 84 controls, we genotyped FAS 1377G>A, FAS 670A>G and FASLG 844T>C polymorphisms and assessed their association with alopecia areata risk. 20394629

2010

dbSNP: rs1380207149
rs1380207149
VDR
0.010 GeneticVariation BEFREE Point mutation of rat Hr at conserved residues corresponding to natural mutants causing alopecia in mice (G985W and a C-terminal deletion DeltaAK) and in humans (P95S, C422Y, E611G, R640Q, C642G, N988S, D1030N, A1040T, V1074M, and V1154D), as well as alteration of residues in the C-terminal Jumonji C domain implicated in histone demethylation activity (C1025G/E1027G and H1143G) revealed that all Hr mutants retained VDR association, and that transrepressor activity was selectively abrogated in C642G, G985W, N988S, D1030N, V1074M, H1143G, and V1154D. 20512927

2010

dbSNP: rs1057517491
rs1057517491
0.010 GeneticVariation BEFREE Cx26-G45E mice displayed reduced viability, hyperkeratosis, scaling, skin folds, and hair loss. 22031297

2011

dbSNP: rs267607477
rs267607477
0.010 GeneticVariation BEFREE The sequence analysis revealed a splice acceptor site mutation (c.IVS8-1G>A) in family A and a missense variant (c.1444G>A, p.Asp482Asn) in family B. Mutations identified in the present study extend the body of evidence implicating the KRT74 gene in the pathogenesis of autosomal dominant hair loss disorders. 21188418

2011

dbSNP: rs72561723
rs72561723
0.010 GeneticVariation BEFREE Cx26-G45E mice displayed reduced viability, hyperkeratosis, scaling, skin folds, and hair loss. 22031297

2011

dbSNP: rs2476601
rs2476601
0.040 GeneticVariation BEFREE PTPN22 1858C>T gene polymorphism has been associated with several autoimmune disorders including alopecia areata. 23570882

2013

dbSNP: rs1217691063
rs1217691063
0.020 GeneticVariation BEFREE The results suggest that MTHFR gene C677T mutation may have an effect on the risk of alopecia areata in the Turkish population. 23954881

2013

dbSNP: rs3820706
rs3820706
0.010 GeneticVariation BEFREE We identified an SNP significantly associated with drug-induced grade 2 alopecia (rs3820706 in CACNB4 (calcium channel voltage-dependent subunit beta 4) on 2q23, P = 8.13 × 10(-9), OR = 3.71) and detected several SNPs that showed some suggestive associations by subgroup analyses. 24025145

2013

dbSNP: rs141480813
rs141480813
0.010 GeneticVariation BEFREE We report a unique patient, a 14 year old male from Lazio region, affected by common variable immunodeficiency associated with autoimmune manifestations (alopecia, onychodystrophy) and heterozygote for the S250C variant located in the SAND domain of the autoimmune regulator gene protein. 25068407

2014

dbSNP: rs201868115
rs201868115
0.010 GeneticVariation BEFREE The severe phenotype of complete baldness was seen in only 1 patient with homozygous c.742C>A. 24586639

2014

dbSNP: rs2294020
rs2294020
0.010 GeneticVariation BEFREE These data suggest that rs2294020 SNP of FOXP3 gene and rs378299 SNP of ICOSLG gene are associated with AA and with a reduced expression of the FOXP3 and ICOSLG genes in alopecia patients. 23196741

2014

dbSNP: rs3138869
rs3138869
AR
0.010 GeneticVariation BEFREE We aimed to compare the rs4045402 and rs3138869 polymorphisms prevalence in a group of 69 selected subjects (AGA+PFS) that used finasteride to treat alopecia and developed persistent side effects, with that in a group of 91 untreated subjects with AGA (AGA), and a group of 76 untreated subjects without AGA (NO-AGA). 24855036

2014

dbSNP: rs378299
rs378299
0.010 GeneticVariation BEFREE These data suggest that rs2294020 SNP of FOXP3 gene and rs378299 SNP of ICOSLG gene are associated with AA and with a reduced expression of the FOXP3 and ICOSLG genes in alopecia patients. 23196741

2014