Source: ALL
Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs116855232
rs116855232
0.750 GeneticVariation GWASCAT We confirmed the association of NUDT15 p.Arg139Cys with leukopenia and alopecia (p = 2.20E-63, 1.32E-69, OR = 6.59, 12.1, respectively), and found a novel association with digestive symptoms (p = 6.39E-04, OR = 1.89). 29923122

2018

dbSNP: rs116855232
rs116855232
0.750 GeneticVariation BEFREE NUDT15 R139C (rs116855232) is a recently identified genetic factor responsible for thiopurine-induced leukocytopenia and hair loss. 26590936

2016

dbSNP: rs116855232
rs116855232
0.750 GeneticVariation BEFREE Extensive hair loss was a recognizable early symptom in patients with the homozygous NUDT15 c.415C>T variant. 26735160

2016

dbSNP: rs116855232
rs116855232
0.750 GeneticVariation BEFREE Therefore, the NUDT15 p.R139C variant is common and strongly associated with AZA-induced early leukopenia and severe alopecia in Korean patients with various neurological diseases. 28566182

2017

dbSNP: rs116855232
rs116855232
0.750 GeneticVariation BEFREE We confirmed the association of NUDT15 p.Arg139Cys with leukopenia and alopecia (p = 2.20E-63, 1.32E-69, OR = 6.59, 12.1, respectively), and found a novel association with digestive symptoms (p = 6.39E-04, OR = 1.89). 29923122

2018

dbSNP: rs116855232
rs116855232
0.750 GeneticVariation BEFREE NUDT R139C was significantly associated with early severe hair loss in Japanese patients with IBD. 26076924

2016

dbSNP: rs9282858
rs9282858
0.710 GeneticVariation BEFREE Our study provides evidence that the SRD5A2 A49T A variant is associated with an increased risk of prostate cancer, lower levels of circulating 3alpha-diolG and decreased risk of baldness. 17136762

2007

dbSNP: rs117927258
rs117927258
0.700 GeneticVariation GWASCAT NUDT15 codon 139 is the best pharmacogenetic marker for predicting thiopurine-induced severe adverse events in Japanese patients with inflammatory bowel disease: a multicenter study. 29923122

2018

dbSNP: rs145080284
rs145080284
0.700 GeneticVariation GWASCAT NUDT15 codon 139 is the best pharmacogenetic marker for predicting thiopurine-induced severe adverse events in Japanese patients with inflammatory bowel disease: a multicenter study. 29923122

2018

dbSNP: rs75466870
rs75466870
0.700 GeneticVariation GWASCAT NUDT15 codon 139 is the best pharmacogenetic marker for predicting thiopurine-induced severe adverse events in Japanese patients with inflammatory bowel disease: a multicenter study. 29923122

2018

dbSNP: rs78844412
rs78844412
0.700 GeneticVariation GWASCAT NUDT15 codon 139 is the best pharmacogenetic marker for predicting thiopurine-induced severe adverse events in Japanese patients with inflammatory bowel disease: a multicenter study. 29923122

2018

dbSNP: rs2476601
rs2476601
0.040 GeneticVariation BEFREE The association between rs2476601 polymorphism in PTPN22 gene and risk of alopecia areata: A meta-analysis of case-control studies. 31096440

2019

dbSNP: rs2476601
rs2476601
0.040 GeneticVariation BEFREE The R620W polymorphism in PTPN22 confers general susceptibility for the development of alopecia areata. 18028494

2008

dbSNP: rs2476601
rs2476601
0.040 GeneticVariation BEFREE PTPN22 1858C>T gene polymorphism has been associated with several autoimmune disorders including alopecia areata. 23570882

2013

dbSNP: rs2476601
rs2476601
0.040 GeneticVariation BEFREE These results suggest that the non-synonymous C1858T substitution in the PTPN22 gene may have an influence on the severity of alopecia areata and provide further evidence for autoimmunity as an aetiological factor in this disorder. 16829308

2006

dbSNP: rs1217691063
rs1217691063
0.020 GeneticVariation BEFREE The results suggest that MTHFR gene C677T mutation may have an effect on the risk of alopecia areata in the Turkish population. 23954881

2013

dbSNP: rs1217691063
rs1217691063
0.020 GeneticVariation BEFREE Of these, only the MTHFR 677 C --> T SNP was associated with alopecia, and only in African Americans (p = 0.032). 18381794

2008

dbSNP: rs1057517491
rs1057517491
0.010 GeneticVariation BEFREE Cx26-G45E mice displayed reduced viability, hyperkeratosis, scaling, skin folds, and hair loss. 22031297

2011

dbSNP: rs111238176
rs111238176
0.010 GeneticVariation BEFREE In a hospital-based case-control study of 84 patients with alopecia areata and 84 controls, we genotyped FAS 1377G>A, FAS 670A>G and FASLG 844T>C polymorphisms and assessed their association with alopecia areata risk. 20394629

2010

dbSNP: rs116548533
rs116548533
0.010 GeneticVariation BEFREE Without affecting the expression, conformation, nuclear location of VDR or heteridimerization with RXR, VDR-R343H impairs the transactivation activity of VDR on downstream transcription, accounting for HVDRR features with alopecia. 29127362

2017

dbSNP: rs121909800
rs121909800
VDR
0.010 GeneticVariation BEFREE Alopecia was seen only with the p.R391S mutation. 28301319

2017

dbSNP: rs13181
rs13181
0.010 GeneticVariation BEFREE Univariate statistical analyses revealed that patients with <i>ERCC2</i> rs13181 T/G and/or <i>CYP3A4</i> rs2740574 A/G genotypes are more likely to develop alopecia; patients with <i>ERCC2</i> rs238406 C/C genotype may develop leukopenia, and patients with <i>GSTT1</i>-null genotype could develop lymphocytopenia (III-IV). 30914949

2019

dbSNP: rs1380207149
rs1380207149
VDR
0.010 GeneticVariation BEFREE Point mutation of rat Hr at conserved residues corresponding to natural mutants causing alopecia in mice (G985W and a C-terminal deletion DeltaAK) and in humans (P95S, C422Y, E611G, R640Q, C642G, N988S, D1030N, A1040T, V1074M, and V1154D), as well as alteration of residues in the C-terminal Jumonji C domain implicated in histone demethylation activity (C1025G/E1027G and H1143G) revealed that all Hr mutants retained VDR association, and that transrepressor activity was selectively abrogated in C642G, G985W, N988S, D1030N, V1074M, H1143G, and V1154D. 20512927

2010

dbSNP: rs1382048442
rs1382048442
0.010 GeneticVariation BEFREE Of these, only the MTHFR 677 C --> T SNP was associated with alopecia, and only in African Americans (p = 0.032). 18381794

2008

dbSNP: rs141480813
rs141480813
0.010 GeneticVariation BEFREE We report a unique patient, a 14 year old male from Lazio region, affected by common variable immunodeficiency associated with autoimmune manifestations (alopecia, onychodystrophy) and heterozygote for the S250C variant located in the SAND domain of the autoimmune regulator gene protein. 25068407

2014