Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs267607591
rs267607591
0.020 GeneticVariation BEFREE We previously reported the first Japanese case of APS/AWS with a LMNA mutation (p.D300N). 27539898

2016

dbSNP: rs267607591
rs267607591
0.020 GeneticVariation BEFREE We report the first Japanese case of APS/AWS with a LMNA mutation (p.D300N). 25327215

2014

dbSNP: rs7574865
rs7574865
0.020 GeneticVariation BEFREE The overall odds ratios for rs7574865 T-allele significantly increased in SLE, RA, T1D, SSc, JIA, and APS (OR = 1.56, 1.25, 1.13, 1.34, 1.25, and 2.15, respectively, P < 0.00001) and in IBD-UC and pSS (OR = 1.11 and 1.33, respectively, P < 0.05). 22714917

2012

dbSNP: rs7574865
rs7574865
0.020 GeneticVariation BEFREE STAT4 and BLK displayed a strong genetic association with primary APS (for rs7574865, odds ratio [OR] 2.19, P=5.17x10(-7); for rs2736340, OR 2.06, P=1.78x10(-6)), while a weak association with IRF5 and no association with BANK1 were observed. 19644876

2009

dbSNP: rs104895461
rs104895461
0.010 GeneticVariation BEFREE Mutation analysis excluded idiopathic infantile hypercalcemia, type 1, and known forms of OPT, and identified a heterozygous germline missense mutation in NOD2 common in PGA (c.1001G>A, p.Arg334Gln). 29933504

2018

dbSNP: rs57077886
rs57077886
0.010 GeneticVariation BEFREE Patients with the heterozygous LMNA p.T10I mutation have distinct clinical features and significantly worse metabolic complications compared with other patients with APS as well as patients with Hutchinson-Gilford progeria syndrome. 29267953

2018

dbSNP: rs2288493
rs2288493
0.010 GeneticVariation BEFREE One SNP (rs2288493) located on the 3'-UTR of TSHR showed an experiment-wide significant APS association (P=7.85E-08, OR=6.18) under a recessive model after Bonferroni correction considering the number of analyzed SNPs. 28424481

2017

dbSNP: rs662
rs662
0.010 GeneticVariation BEFREE Our results indicated that the PON1 L55M polymorphism associated with SLE and associated APS in a population from Cairo of Egypt, while the Q192R polymorphism plays no role in disease susceptibility. 28185016

2017

dbSNP: rs79154414
rs79154414
0.010 GeneticVariation BEFREE Another SNP (rs79154414) located around the C1D showed a genome-wide significant APS association (P=4.84E-08, OR=6.20) under an allelic model after applying the SNP imputation. 28424481

2017

dbSNP: rs854560
rs854560
0.010 GeneticVariation BEFREE Our results indicated that the PON1 L55M polymorphism associated with SLE and associated APS in a population from Cairo of Egypt, while the Q192R polymorphism plays no role in disease susceptibility. 28185016

2017

dbSNP: rs1469042326
rs1469042326
0.010 GeneticVariation BEFREE We report the first Japanese case of APS/AWS with a LMNA mutation (p.D300N). 25327215

2014

dbSNP: rs3765187
rs3765187
0.010 GeneticVariation BEFREE Minor allele carrier of rs3765187 was less frequent in patients with APS (3.8% p=0.032), but not in patients with SLE in the absence of APS (7.9% p=0.32), compared with healthy subjects (10.2%). 23817509

2013

dbSNP: rs4581
rs4581
0.010 GeneticVariation BEFREE Eight previous studies analyzed the association of APS, anti-β(2)-GPI antibodies and/or thrombosis with the Val247Leu polymorphism. 22246055

2012

dbSNP: rs763361
rs763361
0.010 GeneticVariation BEFREE The role of a nonsynonymous CD226 (DNAX-accessory molecule-1) variant (Gly 307Ser) in isolated Addison's disease and autoimmune polyendocrinopathy type 2 pathogenesis. 21521299

2011

dbSNP: rs1316724604
rs1316724604
0.010 GeneticVariation BEFREE The presence of factor V Leiden G506A (FVL) mutation was significantly higher in APS patients with thrombosis compared to healthy controls (11.2% versus 4.9%, P = 0.0043). 19504051

2010

dbSNP: rs1801689
rs1801689
0.010 GeneticVariation BEFREE The Ser88Asn, Cys306Gly and Trp316Ser SNPs were not risk factors for APS in leprosy. 20140737

2010

dbSNP: rs1801690
rs1801690
0.010 GeneticVariation BEFREE The Ser88Asn, Cys306Gly and Trp316Ser SNPs were not risk factors for APS in leprosy. 20140737

2010

dbSNP: rs1801692
rs1801692
0.010 GeneticVariation BEFREE The Ser88Asn, Cys306Gly and Trp316Ser SNPs were not risk factors for APS in leprosy. 20140737

2010

dbSNP: rs777417437
rs777417437
0.010 GeneticVariation BEFREE The presence of factor V Leiden G506A (FVL) mutation was significantly higher in APS patients with thrombosis compared to healthy controls (11.2% versus 4.9%, P = 0.0043). 19504051

2010

dbSNP: rs104895477
rs104895477
0.010 GeneticVariation BEFREE We report a case of PGA in a 6-year-old girl with the NOD2 E383K gene substitution. 19479836

2009

dbSNP: rs2736340
rs2736340
0.010 GeneticVariation BEFREE STAT4 and BLK displayed a strong genetic association with primary APS (for rs7574865, odds ratio [OR] 2.19, P=5.17x10(-7); for rs2736340, OR 2.06, P=1.78x10(-6)), while a weak association with IRF5 and no association with BANK1 were observed. 19644876

2009

dbSNP: rs1369837875
rs1369837875
0.010 GeneticVariation BEFREE The T/T genotype of 807 C/T polymorphism of GP Ia/IIa may be an additional risk for the development of arterial thrombosis in APS. 17728329

2008

dbSNP: rs4986791
rs4986791
0.010 GeneticVariation BEFREE Human tlr4 Asp299Gly and Thr399Ile polymorphisms were evaluated by allele-specific PCR in 110 patients with APS with arterial/venous thrombosis and in 220 controls of the same ethnic origin. 17261530

2007