Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs121908389
rs121908389
0.800 GeneticVariation UNIPROT CYLD mutations underlie Brooke-Spiegler, familial cylindromatosis, and multiple familial trichoepithelioma syndromes. 16922728

2006

dbSNP: rs121908389
rs121908389
0.800 GeneticVariation UNIPROT Two novel CYLD gene mutations in Chinese families with trichoepithelioma and a literature review of 16 families with trichoepithelioma reported in China. 16307661

2005

dbSNP: rs121908389
rs121908389
0.800 GeneticVariation UNIPROT A novel missense mutation in CYLD in a family with Brooke-Spiegler syndrome. 14632188

2003

dbSNP: rs121908389
rs121908389
G 0.800 CausalMutation CLINVAR

dbSNP: rs121908390
rs121908390
T 0.700 CausalMutation CLINVAR

dbSNP: rs536105592
rs536105592
0.010 GeneticVariation BEFREE We found no CYLD variants but identified an FABP12 variant (rs536105592 G>A) in the patients with both MUHH and MFT. 30809827

2019

dbSNP: rs121908388
rs121908388
0.010 GeneticVariation BEFREE The CYLD p.R758X worldwide recurrent nonsense mutation detected in patients with multiple familial trichoepithelioma type 1, Brooke-Spiegler syndrome and familial cylindromatosis represents a mutational hotspot in the gene. 26861065

2016

dbSNP: rs2701108
rs2701108
0.010 GeneticVariation BEFREE Our data show that rs3072 at GDF7 and rs2701108 at TBX5 are also associated with EAC and conclude that both loci confer disease risk also at later stages of the BE/EAC sequence. 26783083

2016

dbSNP: rs3072
rs3072
0.010 GeneticVariation BEFREE Our data show that rs3072 at GDF7 and rs2701108 at TBX5 are also associated with EAC and conclude that both loci confer disease risk also at later stages of the BE/EAC sequence. 26783083

2016

dbSNP: rs3784262
rs3784262
0.010 GeneticVariation BEFREE In contrast, rs3784262 at ALDH1A2 was highly significantly associated with BE, but showed no association with EAC. 26783083

2016

dbSNP: rs139429793
rs139429793
0.010 GeneticVariation BEFREE Sequencing of OANC1 DNA identified homozygous TP53 missense (c.856G[A, p.E286K)and SMAD4 nonsense (c.1333C[T, p.R445X) mutations.OANC1 are tumorigenic when injected sub-cutaneously into SCID mice and xenografts were positive for columnar, glandular and intestinal epithelial markers commonly expressed in EAC. 24077944

2014

dbSNP: rs1462159134
rs1462159134
0.010 GeneticVariation BEFREE Sequencing of OANC1 DNA identified homozygous TP53 missense (c.856G[A, p.E286K)and SMAD4 nonsense (c.1333C[T, p.R445X) mutations.OANC1 are tumorigenic when injected sub-cutaneously into SCID mice and xenografts were positive for columnar, glandular and intestinal epithelial markers commonly expressed in EAC. 24077944

2014

dbSNP: rs377767360
rs377767360
0.010 GeneticVariation BEFREE Sequencing of OANC1 DNA identified homozygous TP53 missense (c.856G[A, p.E286K)and SMAD4 nonsense (c.1333C[T, p.R445X) mutations.OANC1 are tumorigenic when injected sub-cutaneously into SCID mice and xenografts were positive for columnar, glandular and intestinal epithelial markers commonly expressed in EAC. 24077944

2014

dbSNP: rs6214
rs6214
0.010 GeneticVariation BEFREE The A allele of SNP rs6214 in the IGF-I gene was associated with EAC, and with HNC in women. 24608110

2014

dbSNP: rs786201059
rs786201059
0.010 GeneticVariation BEFREE Sequencing of OANC1 DNA identified homozygous TP53 missense (c.856G[A, p.E286K)and SMAD4 nonsense (c.1333C[T, p.R445X) mutations.OANC1 are tumorigenic when injected sub-cutaneously into SCID mice and xenografts were positive for columnar, glandular and intestinal epithelial markers commonly expressed in EAC. 24077944

2014

dbSNP: rs2274223
rs2274223
0.010 GeneticVariation BEFREE In contrast to the modulation of the risk of ESCC in Asians, it is unlikely that the PLCE1 rs2274223 and RFT2 13042395 SNPs play a role in EAC or ESCC susceptibility in Dutch Caucasians. 23222411

2013

dbSNP: rs397507444
rs397507444
0.010 GeneticVariation BEFREE In addition, we found that the MTHFR A1298C polymorphism might influence risk ofESCC and EAC in the overall studies. 23679298

2013

dbSNP: rs9257809
rs9257809
0.010 GeneticVariation BEFREE In conclusion, this study provides evidence that MHC rs9257809 and FOXF1 rs9936833 variants, associated with Barrett's esophagus, also increase ESCC and EAC susceptibility in Caucasians. 23504527

2013

dbSNP: rs9936833
rs9936833
0.010 GeneticVariation BEFREE In conclusion, this study provides evidence that MHC rs9257809 and FOXF1 rs9936833 variants, associated with Barrett's esophagus, also increase ESCC and EAC susceptibility in Caucasians. 23504527

2013

dbSNP: rs2305764
rs2305764
0.010 GeneticVariation BEFREE DNA from 886 Caucasian participants (198 non-reflux controls, 305 RE, 254 BE, 129 EAC) was collected for the determination of the Myo9B gene polymorphism (rs2305764). 22954106

2012

dbSNP: rs917997
rs917997
0.010 GeneticVariation BEFREE These data show a strong association of the IL-18RAP SNP rs917997 locus with BE and EAC and suggestive association of the Barrett's population with the IL-18-607 C/A promoter polymorphism. 22664470

2012

dbSNP: rs2279744
rs2279744
0.010 GeneticVariation BEFREE However, in a multivariate analysis, patients with EAC carrying the heterozygous MDM2 (rs2279744) T/G genotype had significantly improved DFS compared with patients carrying the wild-type genotype (adjusted hazard ratio (AHR), 0.63; 95% confidence interval (CI) [0.45-0.88]). 20922573

2011

dbSNP: rs5030625
rs5030625
0.010 GeneticVariation BEFREE Patients with EAC harboring the homozygous CDH1 (rs5030625) GA/GA genotype had a significantly reduced survival as compared with patients carrying the wild-type genotype AHR 4.0, 95% CI [1.4-11]. 20922573

2011

dbSNP: rs6898743
rs6898743
GHR
0.010 GeneticVariation BEFREE GH receptor SNP rs6898743 was associated with EAC (adjusted P = .0112). 20403354

2010

dbSNP: rs1695
rs1695
0.010 GeneticVariation BEFREE Our review identified GSTP1(Ile105Val) as a possible risk factor for BE and EAC in Caucasian males. 19222528

2009