Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs2476601
rs2476601
0.030 GeneticVariation BEFREE (3) regarding the subtypes of AITDs, patients with Graves' disease (GD) had a significant higher degree of C1858T polymorphism (TT vs. CC, OR=2.35, 95%CI=1.36˜4.05; TC vs. CC, OR=1.46, 95%CI=1.12˜1.89; TT/TC vs. CC, OR=1.54, 95%CI=1.33˜1.80; TT vs. TC/CC, OR=2.16, 95%CI=1.25˜3.72), while no association was observed in patients with Hashimoto's thyroiditis (HT).No publication bias was observed. 22374238

2012

dbSNP: rs2476601
rs2476601
0.030 GeneticVariation BEFREE Significant difference in the distribution of the haplotype suggests that the PTPN22 gene rather than rs2476601 is involved in the development of AITD in the Japanese population. 20615141

2010

dbSNP: rs2476601
rs2476601
0.030 GeneticVariation BEFREE The single nucleotide polymorphism (SNP) C1858T within the PTPN22 gene was recently associated with autoimmune thyroid disease (AITD) and type I diabetes (T1D). 19090780

2009

dbSNP: rs3087243
rs3087243
0.030 GeneticVariation BEFREE With respect to the rs3087243 (+6230G>A) polymorphism of CTLA4, the first sister had type 1 diabetes and AITD and had the GG genotype, whereas the second and third sisters, who had type 1 diabetes without AITD, had the AG genotype. 19506323

2009

dbSNP: rs3087243
rs3087243
0.030 GeneticVariation BEFREE Taken together, our study suggested that the CT60 polymorphism (rs3087243) in CTLA-4 gene might confer susceptibility to the AITDs (GD/HT). 24697361

2014

dbSNP: rs3087243
rs3087243
0.030 GeneticVariation BEFREE Furthermore, a joint analysis, with the INS and CTLA4 SNPs, revealed that CTLA4 rs3087243, ERBB3 rs2292399, and CLEC16A rs2903692, but not INS rs689, were significant risk factors for the cooccurrence of AITD in Japanese T1D. 18940880

2009

dbSNP: rs10004195
rs10004195
0.010 GeneticVariation BEFREE The haplotype (AGT) frequency of TLR10 rs4129009, rs11096956, and rs10004195 was higher in the AITD group than in healthy controls (OR=2.1, corrected p=0.03). 25295614

2015

dbSNP: rs10181656
rs10181656
0.010 GeneticVariation BEFREE The genotypes of rs10181656 differed significantly in GD patients from controls (p=0.012); G allele frequencies were significantly higher in AITD patients than the controls (p=0.014 and 0.031, respectively). 25019342

2014

dbSNP: rs1053005
rs1053005
0.010 GeneticVariation BEFREE The allele A and AA genotype of SNP rs1053005 may protect individuals from the susceptibility to AITD and their frequency decreased in AITD patients. 24081513

2013

dbSNP: rs1061502
rs1061502
0.010 GeneticVariation BEFREE Our results showed that the AG genotype and the minor allele G frequency of rs1131665 and rs1061502 in AITD patients were both higher than those of the controls (rs1131665: AG genotype: <i>P</i> = 0.017, OR = 1.968; allele G: <i>P</i> = 0.018, OR = 1.946; rs1061502: AG genotype: <i>P</i> = 0.029, OR = 1.866; allele G: <i>P</i> = 0.031, OR = 1.847). 30774658

2019

dbSNP: rs1131665
rs1131665
0.010 GeneticVariation BEFREE Our results showed that the AG genotype and the minor allele G frequency of rs1131665 and rs1061502 in AITD patients were both higher than those of the controls (rs1131665: AG genotype: <i>P</i> = 0.017, OR = 1.968; allele G: <i>P</i> = 0.018, OR = 1.946; rs1061502: AG genotype: <i>P</i> = 0.029, OR = 1.866; allele G: <i>P</i> = 0.031, OR = 1.847). 30774658

2019

dbSNP: rs1179251
rs1179251
0.010 GeneticVariation BEFREE Variants at rs2046068, rs2227478, and rs1179251 were associated with the AITD teenagers. 28839453

2017

dbSNP: rs12492609
rs12492609
0.010 GeneticVariation BEFREE We found that the allele T of rs12492609 in <i>TMEM39A</i> was associated with AITD and Hashimoto's thyroiditis (HT) (<i>p</i> = 0.023; <i>p</i> = 0.028 respectively). 31553233

2019

dbSNP: rs1267634673
rs1267634673
0.010 GeneticVariation BEFREE Investigation of an individual with AITD who was incorrectly diagnosed with RTH led to the fortuitous discovery of a THRB gene variant (G339S) in the proposita's father, paternal aunt, and cousin. 23806029

2013

dbSNP: rs13277113
rs13277113
BLK
0.010 GeneticVariation BEFREE Genetic variants of rs13277113 and rs2736340 of BLK were associated with susceptibility to GD, HT and AITD in an ethnic Chinese population. 30589937

2019

dbSNP: rs1544410
rs1544410
VDR
0.010 GeneticVariation BEFREE <i>VDR</i> rs1544410 polymorphism was associated with a reduced risk of AITD in European and African populations, but with an increased risk of AITD in Asian populations. 29765404

2018

dbSNP: rs17445836
rs17445836
0.010 GeneticVariation BEFREE Both rs17445836</span> and rs2280381 were associated with the presence of an antimicrosomal antibody (AmiA), and rs2280381 was also associated with the presence of an antithyroglobulin antibody (ATA) in AITD. 25989711

2015

dbSNP: rs17593222
rs17593222
0.010 GeneticVariation BEFREE In addition, the allele G of rs17593222 may increase the ophthalmopathy risk in AITD patients. 24081513

2013

dbSNP: rs17855750
rs17855750
0.010 GeneticVariation BEFREE Results Compared with controls, rs153109 displayed significant associations with GD in allele and genotype frequencies (P = 0.002 and P = 0.008, respectively) and rs17855750 displayed significant associations with HT in allele frequencies (P = 0.02), whereas no differences in genotype or allele frequencies were found between AITD patients and controls at rs181206. 30694795

2019

dbSNP: rs1800871
rs1800871
0.010 GeneticVariation BEFREE Meta-analyses were conducted on the associations between AITD and the -1082 G/A (rs1800896), -819 C/T (rs1800871) and -592 C/A (rs1800872) polymorphisms in IL10, and the haplotype of these polymorphisms and AITD. 27500787

2016

dbSNP: rs1800872
rs1800872
0.010 GeneticVariation BEFREE Meta-analyses were conducted on the associations between AITD and the -1082 G/A (rs1800896), -819 C/T (rs1800871) and -592 C/A (rs1800872) polymorphisms in IL10, and the haplotype of these polymorphisms and AITD. 27500787

2016

dbSNP: rs1800896
rs1800896
0.010 GeneticVariation BEFREE Meta-analyses were conducted on the associations between AITD and the -1082 G/A (rs1800896), -819 C/T (rs1800871) and -592 C/A (rs1800872) polymorphisms in IL10, and the haplotype of these polymorphisms and AITD. 27500787

2016

dbSNP: rs2048722
rs2048722
TPO
0.010 GeneticVariation BEFREE Serum levels of TPOAb were significantly higher in AITD patients with TPO rs2071400 T carriers (CT + TT genotypes) than in those with the CC genotype (p=0.0295), and were also significantly higher in AITD patients with TPO rs2048722 T carriers (CT + TT genotypes) than in those with the CC genotype (p=0.0056). 28845025

2017

dbSNP: rs2069550
rs2069550
TG
0.010 GeneticVariation BEFREE Latitude and ethnicity significantly affected the association between rs2076740 and rs2069550 polymorphisms and AITD, indicating their protective effects in allele or dominant model (P = 0.012, 0.012, 0.012, 0.009, 0.009). 30139952

2019

dbSNP: rs2071400
rs2071400
TPO
0.010 GeneticVariation BEFREE Serum levels of TPOAb were significantly higher in AITD patients with TPO rs2071400 T carriers (CT + TT genotypes) than in those with the CC genotype (p=0.0295), and were also significantly higher in AITD patients with TPO rs2048722 T carriers (CT + TT genotypes) than in those with the CC genotype (p=0.0056). 28845025

2017