Disease: Childhood Acute Lymphoblastic Leukemia
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs1206846668
FOLH1
0.724 0.400 11 49185773 missense variant G/A snv 4.1E-06 16
rs1217691063
MTHFR
0.330 0.920 1 11796309 missense variant A/G snv 4.0E-06 7.0E-06 614
rs121913459
ABL1
0.672 0.160 9 130872896 missense variant C/T snv 25
rs12402181
SGIP1 ; MIR3117
0.882 0.120 1 66628488 mature miRNA variant G/A snv 0.17 0.24 3
rs12434881
CEBPE
0.882 0.120 14 23119433 5 prime UTR variant G/A snv 0.36 3
rs1275561861
HLA-A
0.672 0.360 6 29944350 missense variant G/A snv 23
rs12803915
NEAT1 ; MIR612
0.882 0.120 11 65444508 non coding transcript exon variant G/A snv 0.16 0.17 3
rs1296957097
CHEK2
0.882 0.120 22 28719401 missense variant A/G snv 3
rs1310678797
VDR
0.882 0.120 12 47857143 missense variant C/T snv 7.0E-06 3
rs1361742125
NR3C1
0.882 0.120 5 143399842 missense variant T/C snv 4.0E-06 7.0E-06 3
rs138047632
LOC107987304 ; SLC19A1
0.882 0.120 21 45525860 missense variant A/G snv 2.4E-03 2.2E-03 3
rs140422742
CYP3A4
0.882 0.120 7 99778046 missense variant T/C;G snv 7.6E-05 6.3E-05 3
rs1412792500
NR3C1
0.882 0.120 5 143400541 missense variant T/C snv 4.0E-06 1.4E-05 3
rs1427331568
NR3C1
0.882 0.120 5 143314010 missense variant G/C snv 3
rs143125661
TPMT
0.882 0.120 6 18149120 missense variant C/T snv 4.0E-06 7.0E-06 3
rs1448674651
TYMS ; ENOSF1
0.667 0.560 18 671384 missense variant G/A;C snv 4.0E-06 23
rs1470755915
RUNX1T1
0.776 0.240 8 92005229 missense variant C/A snv 7.0E-06 10
rs1482545954
NLRP2
0.882 0.120 19 54982407 missense variant C/T snv 7.0E-06 3
rs153109
IL27
0.623 0.600 16 28507775 intron variant T/C snv 0.43 37
rs1544105
FPGS
0.851 0.200 9 127800446 intron variant C/T snv 0.48 4
rs1573613
ETV6
0.882 0.120 12 11894684 3 prime UTR variant T/C snv 0.48 3
rs16754
WT1
0.732 0.240 11 32396399 synonymous variant T/C snv 0.24; 4.0E-06 0.17 15
rs1695
GSTP1
0.457 0.880 11 67585218 missense variant A/G snv 0.34 0.36 188
rs17007695 0.851 0.120 4 141788570 intergenic variant T/C snv 7.7E-02 4
rs17069665
FOXO3
0.882 0.120 6 108620265 intron variant A/C;G snv 4