Disease: Childhood Acute Lymphoblastic Leukemia
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs2069727
IFNG ; IFNG-AS1
0.763 0.320 12 68154443 intron variant T/A;C snv 9
rs2231142
ABCG2
0.583 0.680 4 88131171 missense variant G/C;T snv 4.0E-06; 0.12 56
rs2295080
MTOR
0.695 0.320 1 11262571 upstream gene variant G/C;T snv 20
rs34767364
NBN
0.701 0.280 8 89971232 missense variant G/A;C snv 2.5E-03 20
rs35134728
C1orf167 ; MTHFR
0.882 0.120 1 11787277 3 prime UTR variant -/AGA delins 3
rs35201683
HFE
0.732 0.360 6 26094205 stop gained C/A;T snv 1.4E-03 12
rs3731217
CDKN2A
0.763 0.320 9 21984662 intron variant A/C;T snv 10
rs3731249
CDKN2A
0.683 0.320 9 21970917 missense variant C/A;G;T snv 2.1E-02 23
rs3745274
CYP2B6
0.672 0.480 19 41006936 missense variant G/A;T snv 4.0E-06; 0.27 30
rs3824662
GATA3
0.752 0.320 10 8062245 intron variant C/A;T snv 11
rs397507444
MTHFR
0.405 0.880 1 11794407 missense variant T/G snv 306
rs397507520
PTPN11
0.658 0.520 12 112453279 missense variant G/C;T snv 39
rs41320251
ITPA
0.882 0.120 20 3213196 missense variant C/A;G snv 3
rs414580
MSR1
0.882 0.120 8 16177793 intron variant T/A;C snv 3
rs56149945
NR3C1
0.595 0.680 5 143399752 missense variant T/A;C snv 2.0E-02 49
rs569954362
SLC19A1
0.851 0.160 21 45530871 synonymous variant G/A snv 4
rs587781823
ATM
0.851 0.280 11 108284370 frameshift variant -/T delins 5
rs61754966
NBN
0.701 0.280 8 89978293 missense variant T/C;G snv 1.2E-03 23
rs62571442
MIR3689F ; LOC101448202 ; MIR3689E ; MIR3689D1 ; MIR3689D2 ; MIR3689C ; MIR3689B ; MIR3689A
0.882 0.120 9 134850278 non coding transcript exon variant G/A;C;T snv 0.58; 4.4E-03 3
rs6461639
RAPGEF5
0.882 0.120 7 22147337 intron variant T/A;C snv 3
rs6535455
HPSE
0.851 0.160 4 83310951 intron variant T/A;C snv 4
rs6966
PPP1R13L
0.807 0.160 19 45379704 3 prime UTR variant T/A;G snv 0.18 6
rs7039798
FPGS
0.882 0.120 9 127794947 intron variant G/A;C snv 3
rs724159947
ETV6
0.851 0.120 12 11869601 missense variant C/T snv 6
rs72481843
NR3C1
0.882 0.120 5 143300685 splice donor variant C/G snv 3