Disease: Malignant neoplasm of stomach
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs41274221
MCM7 ; MIR106B ; MIR25 ; MIR93
0.851 0.160 7 100093577 mature miRNA variant C/T snv 6.4E-05 4.9E-05 6
rs4919510
SEMA4G ; MIR608 ; MRPL43
0.641 0.520 10 100975021 mature miRNA variant C/G snv 0.27 0.27 32
rs1536309
MIR146B
0.851 0.160 10 102435445 upstream gene variant A/G snv 0.32 7
rs5742612
LOC105369944 ; IGF1
0.752 0.440 12 102481086 intron variant A/G snv 5.6E-02 11
rs4648068
NFKB1
0.790 0.240 4 102597148 intron variant A/G snv 0.31 9
rs5498
ICAM4 ; ICAM1
0.531 0.760 19 10285007 missense variant A/G snv 0.44 0.37 99
rs1047768
ERCC5 ; BIVM-ERCC5
0.695 0.320 13 102852167 synonymous variant T/C snv 0.52 0.59 20
rs17655
BIVM-ERCC5 ; ERCC5
0.597 0.560 13 102875652 missense variant G/C snv 0.28 0.30 52
rs873601
BIVM-ERCC5 ; ERCC5
0.677 0.360 13 102875987 3 prime UTR variant G/A snv 0.59 25
rs861539
KLC1 ; XRCC3
0.519 0.680 14 103699416 missense variant G/A snv 0.29 0.30 104
rs111638916
PSMD10
0.925 0.080 X 108084839 3 prime UTR variant G/A snv 3
rs3783553
IL1A
0.667 0.480 2 112774138 3 prime UTR variant -/TGAA delins 26
rs1143623
IL1B
0.677 0.440 2 112838252 upstream gene variant C/G snv 0.24 29
rs7903146
TCF7L2
0.554 0.680 10 112998590 intron variant C/G;T snv 93
rs3807987
CAV1
0.732 0.280 7 116539780 intron variant G/A snv 7.6E-02 17
rs7804372
CAV1
0.716 0.320 7 116554174 intron variant T/A snv 0.27 19
rs4986790
TLR4
0.438 0.800 9 117713024 missense variant A/G;T snv 6.1E-02; 4.0E-06 223
rs4986791
TLR4
0.456 0.840 9 117713324 missense variant C/T snv 5.7E-02 4.9E-02 182
rs397507444
MTHFR
0.405 0.880 1 11794407 missense variant T/G snv 306
rs1217691063
MTHFR
0.330 0.920 1 11796309 missense variant A/G snv 4.0E-06 7.0E-06 614
rs1801133
MTHFR
0.472 0.880 1 11796321 missense variant G/A snv 0.31 0.27 174
rs1800449
LOX
0.641 0.400 5 122077513 missense variant C/A;T snv 4.0E-06; 0.17 33
rs1801282
PPARG
0.500 0.840 3 12351626 missense variant C/G snv 0.11 8.9E-02 131
rs2675
ITGB5
0.882 0.120 3 124763266 3 prime UTR variant T/G snv 0.17 4
rs13252298
PCAT2 ; PCAT1 ; PRNCR1 ; CASC19
0.827 0.160 8 127082911 non coding transcript exon variant A/G snv 0.24 8