Disease: High density lipoprotein measurement
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs10408163
ZC3H4
19 47093845 non coding transcript exon variant T/C snv 0.52 6
rs1126930
PRKAG1 ; DDN-AS1
12 49005349 missense variant G/C snv 2.1E-02 2.1E-02 5
rs12328675
COBLL1
2 164684290 3 prime UTR variant T/C snv 0.13 4
rs12967135 18 60181790 intergenic variant G/A snv 0.24 8
rs2303108
ZC3H4
19 47086638 intron variant T/C snv 0.63 3
rs4691380
PDGFC
4 156798972 intron variant C/T snv 0.45 4
rs4841132
LOC157273
8 9326086 non coding transcript exon variant A/G snv 0.89 14
rs7621025
STAG1
3 136553404 intron variant T/A;C snv 3
rs7730898
RANBP17
5 171032671 intron variant G/A snv 0.75 2
rs9942416 5 75741470 intergenic variant C/G snv 0.53 9
rs998584 6 43790159 downstream gene variant C/A snv 0.41 11
rs2257129
LOC105378522
1.000 0.040 10 121139183 regulatory region variant T/C snv 0.82 3
rs2954021 1.000 0.040 8 125469835 intron variant A/G snv 0.54 15
rs823114
NUCKS1
1.000 0.040 1 205750404 upstream gene variant G/A snv 0.45 3
rs11727676
HHIP
0.776 0.080 4 144737912 synonymous variant T/C snv 6.6E-02 6.4E-02 14
rs2296172
MACF1
1.000 0.080 1 39370145 missense variant A/G;T snv 0.19; 8.0E-06 4
rs7607980
COBLL1
1.000 0.080 2 164694691 missense variant T/C snv 0.11 0.13 8
rs9816226
DGKG
1.000 0.080 3 186116710 intron variant A/T snv 0.82 5
rs10968576
LINGO2
0.882 0.120 9 28414341 intron variant A/G snv 0.26 10
rs12310617 0.851 0.120 12 3060327 intergenic variant C/T snv 0.11 16
rs12369179
ZCCHC8
0.851 0.120 12 122479003 intron variant C/T snv 5.9E-02 16
rs12420422 0.851 0.120 11 123009573 intergenic variant G/A snv 3.4E-02 16
rs12579302
ATP2B1
0.851 0.120 12 89656726 intron variant A/G snv 0.15 19
rs13114738
SLC39A8
0.851 0.120 4 102363708 intron variant C/A;T snv 16
rs1558902
FTO
0.827 0.120 16 53769662 intron variant T/A snv 0.31 21