Disease: High density lipoprotein measurement
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs1121980
FTO
0.807 0.240 16 53775335 intron variant G/A;C snv 18
rs13107325
SLC39A8
0.776 0.520 4 102267552 missense variant C/A;T snv 4.0E-06; 4.5E-02 34
rs13114738
SLC39A8
0.851 0.120 4 102363708 intron variant C/A;T snv 16
rs1728918 0.827 0.160 2 27412596 upstream gene variant A/G;T snv 19
rs2296172
MACF1
1.000 0.080 1 39370145 missense variant A/G;T snv 0.19; 8.0E-06 4
rs2307111
POC5
0.925 0.120 5 75707853 missense variant T/A;C snv 4.5E-06; 0.47 5
rs2943634 0.763 0.200 2 226203364 intergenic variant A/C;G snv 15
rs3184504
SH2B3 ; ATXN2
0.572 0.600 12 111446804 missense variant T/A;C;G snv 0.67 92
rs4506565
TCF7L2
0.790 0.280 10 112996282 intron variant A/G;T snv 22
rs4704221
CERT1
0.851 0.120 5 75463358 intron variant T/A;C snv 16
rs478442 0.851 0.120 2 21176344 intergenic variant G/C;T snv 18
rs4905014
ITPK1
0.851 0.120 14 92945686 intron variant G/A;C snv 16
rs7115242
SIK3
0.851 0.120 11 117037567 intron variant A/G;T snv 16
rs7621025
STAG1
3 136553404 intron variant T/A;C snv 3
rs765547 0.827 0.160 8 20008763 intergenic variant G/A;C;T snv 18
rs12229654 0.763 0.320 12 110976657 intergenic variant T/G snv 4.8E-03 20
rs1126930
PRKAG1 ; DDN-AS1
12 49005349 missense variant G/C snv 2.1E-02 2.1E-02 5
rs12420422 0.851 0.120 11 123009573 intergenic variant G/A snv 3.4E-02 16
rs8082812 0.851 0.120 18 8522684 intergenic variant C/A snv 4.6E-02 16
rs6759518
SLC30A3
0.851 0.120 2 27263727 intron variant G/C snv 5.5E-02 16
rs12369179
ZCCHC8
0.851 0.120 12 122479003 intron variant C/T snv 5.9E-02 16
rs11727676
HHIP
0.776 0.080 4 144737912 synonymous variant T/C snv 6.6E-02 6.4E-02 14
rs4803750
BCL3
0.807 0.240 19 44744370 upstream gene variant A/G snv 7.7E-02 22
rs17140821 0.851 0.120 7 19177581 regulatory region variant G/A snv 7.9E-02 16
rs2074755
BAZ1B
0.807 0.240 7 73462836 non coding transcript exon variant T/C snv 9.2E-02 20