Disease: High density lipoprotein measurement
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs10408163
ZC3H4
19 47093845 non coding transcript exon variant T/C snv 0.52 6
rs1126930
PRKAG1 ; DDN-AS1
12 49005349 missense variant G/C snv 2.1E-02 2.1E-02 5
rs12328675
COBLL1
2 164684290 3 prime UTR variant T/C snv 0.13 4
rs12967135 18 60181790 intergenic variant G/A snv 0.24 8
rs2303108
ZC3H4
19 47086638 intron variant T/C snv 0.63 3
rs4691380
PDGFC
4 156798972 intron variant C/T snv 0.45 4
rs4841132
LOC157273
8 9326086 non coding transcript exon variant A/G snv 0.89 14
rs7621025
STAG1
3 136553404 intron variant T/A;C snv 3
rs7730898
RANBP17
5 171032671 intron variant G/A snv 0.75 2
rs9942416 5 75741470 intergenic variant C/G snv 0.53 9
rs998584 6 43790159 downstream gene variant C/A snv 0.41 11
rs9939609
FTO
0.559 0.720 16 53786615 intron variant T/A snv 0.41 98
rs3184504
SH2B3 ; ATXN2
0.572 0.600 12 111446804 missense variant T/A;C;G snv 0.67 92
rs1333049
CDKN2B-AS1
0.614 0.520 9 22125504 intron variant G/C snv 0.41 60
rs780094
GCKR
0.658 0.400 2 27518370 intron variant T/C snv 0.67 62
rs2075650
TOMM40
0.662 0.360 19 44892362 intron variant A/G snv 0.13 0.13 45
rs4420638
APOC1
0.708 0.520 19 44919689 downstream gene variant A/G snv 0.18 43
rs964184
ZPR1
0.716 0.440 11 116778201 3 prime UTR variant G/C snv 0.82 47
rs174547
FADS2 ; FADS1
0.742 0.240 11 61803311 intron variant T/C snv 0.28 33
rs1421085
FTO
0.752 0.280 16 53767042 intron variant T/C snv 0.31 28
rs12229654 0.763 0.320 12 110976657 intergenic variant T/G snv 4.8E-03 20
rs2943634 0.763 0.200 2 226203364 intergenic variant A/C;G snv 15
rs10401969
SUGP1
0.776 0.240 19 19296909 intron variant T/C snv 0.10 25
rs11727676
HHIP
0.776 0.080 4 144737912 synonymous variant T/C snv 6.6E-02 6.4E-02 14
rs13107325
SLC39A8
0.776 0.520 4 102267552 missense variant C/A;T snv 4.0E-06; 4.5E-02 34