TBC1D1, TBC1 domain family member 1, 23216

N. diseases: 25; N. variants: 7
Source: ALL
Disease Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
CUI: C0028754
Disease: Obesity
Obesity
0.390 GeneticVariation disease BEFREE In humans, variants in TBC1D1 and TBC1D4 are linked to obesity and insulin resistance and type 2 diabetes. 31627187 2020
CUI: C0028754
Disease: Obesity
Obesity
0.390 Biomarker disease BEFREE Two related RabGAPs, TBC1D1 and TBC1D4 (=AS160) have been described to be associated with obesity-related traits and type 2 diabetes in both mice and humans. 29784647 2018
CUI: C0028754
Disease: Obesity
Obesity
0.390 GeneticVariation disease BEFREE For SNP rs58983546" genes_norm="23216">Arg695Cys (rs58983546) in TBC1D1 we detected nominal association with obesity (pTDT = 0.03 in 705 trios). 26828654 2016
CUI: C0028754
Disease: Obesity
Obesity
0.390 GeneticVariation disease BEFREE To address this question, we generated a mouse model harboring a TBC1D1(Ser231Ala) knockin (KI) mutation and found that the KI mice developed obesity on a normal chow diet. 27307439 2016
CUI: C0028754
Disease: Obesity
Obesity
0.390 GeneticVariation disease BEFREE HTR2C, LEP, FTO and TBC1D1 represented the top genes for weight gain during treatment with a SGAP and/or MS. A genome-wide signal (FTO rs9930506) associated previously with obesity was associated with psychotropic-induced weight gain. 25946404 2015
CUI: C0028754
Disease: Obesity
Obesity
0.390 Biomarker disease BEFREE These complementary results could contribute to further understand the role of TBC1D1 in developing obesity. 23374713 2013
CUI: C0028754
Disease: Obesity
Obesity
0.390 GeneticVariation disease BEFREE Our analysis suggests that R125W in TBC1D1 plays a role in the binding of an effector protein, but we find no evidence that the R125W variant is related to mean BMI or odds of obesity in a general population sample. 23667688 2013
CUI: C0028754
Disease: Obesity
Obesity
0.390 Biomarker disease CTD_human These results confirm a putative role of TBC1D1 R125W variant in familial obesity predisposition. 18325908 2008
CUI: C0028754
Disease: Obesity
Obesity
0.390 Biomarker disease CTD_human Our data strongly suggest that mutation of Tbc1d1 suppresses high-fat diet-induced obesity by increasing lipid use in skeletal muscle. 18931681 2008
CUI: C0028754
Disease: Obesity
Obesity
0.390 GeneticVariation disease BEFREE Analysis of 16 microsatellite markers on chromosome 4 restricted to the 42 pedigrees carrying the TBC1D1 R125W variant allele also revealed a suggestive evidence of linkage with obesity (maximum likelihood binomial LOD of 2.73, P = 0.0002) on chromosome 4p14, where resides TBC1D1. 18325908 2008
CUI: C0028754
Disease: Obesity
Obesity
0.390 Biomarker disease CTD_human We identified a coding variant (R125W) in TBC1D1 that segregated with the disease in 4p15-14-linked obesity pedigrees. 16893906 2006
CUI: C0028754
Disease: Obesity
Obesity
0.390 Biomarker disease BEFREE TBC1D1 is a candidate for a severe obesity gene and evidence for a gene/gene interaction in obesity predisposition. 16893906 2006
CUI: C1968949
Disease: Cakut
Cakut
0.310 Biomarker disease GENOMICS_ENGLAND These data demonstrate heterozygous deactivating TBC1D1 mutations in CAKUT patients with a similar renal and ureteral phenotype, and provide evidence that TBC1D1 mutations may contribute to CAKUT pathogenesis, possibly via a role in glucose homeostasis. 26572137 2016
CUI: C1968949
Disease: Cakut
Cakut
0.310 GeneticVariation disease BEFREE These data demonstrate heterozygous deactivating TBC1D1 mutations in CAKUT patients with a similar renal and ureteral phenotype, and provide evidence that TBC1D1 mutations may contribute to CAKUT pathogenesis, possibly via a role in glucose homeostasis. 26572137 2016
CUI: C1968949
Disease: Cakut
Cakut
0.310 Biomarker disease GENOMICS_ENGLAND These data demonstrate heterozygous deactivating TBC1D1 mutations in CAKUT patients with a similar renal and ureteral phenotype, and provide evidence that TBC1D1 mutations may contribute to CAKUT pathogenesis, possibly via a role in glucose homeostasis. 26572137 2016
CUI: C0023508
Disease: White Blood Cell Count procedure
White Blood Cell Count procedure
0.100 GeneticVariation phenotype GWASCAT Leveraging Polygenic Functional Enrichment to Improve GWAS Power. 30595370 2019
CUI: C0200638
Disease: Eosinophil count procedure
Eosinophil count procedure
0.100 GeneticVariation phenotype GWASCAT Leveraging Polygenic Functional Enrichment to Improve GWAS Power. 30595370 2019
CUI: C0200635
Disease: Lymphocyte Count measurement
Lymphocyte Count measurement
0.100 GeneticVariation phenotype GWASCAT The Allelic Landscape of Human Blood Cell Trait Variation and Links to Common Complex Disease. 27863252 2016
CUI: C0029408
Disease: Degenerative polyarthritis
Degenerative polyarthritis
0.100 GeneticVariation disease GWASDB Identification of new susceptibility loci for osteoarthritis (arcOGEN): a genome-wide association study. 22763110 2012
CUI: C0202236
Disease: Triglycerides measurement
Triglycerides measurement
0.100 GeneticVariation phenotype GWASDB Large-scale gene-centric meta-analysis across 32 studies identifies multiple lipid loci. 23063622 2012
CUI: C1281440
Disease: Familial obesity
Familial obesity
0.030 GeneticVariation disease BEFREE The interaction enhances the efficiency by which AMPK phosphorylates TBC1D1 on its key regulatory site, Ser<sup>237</sup> Furthermore, the interaction is reduced by a naturally occurring R125W mutation in the PTB1 domain of TBC1D1, previously found to be associated with severe familial obesity in females, with a concomitant reduction in Ser<sup>237</sup> phosphorylation. 30135087 2018
CUI: C2937224
Disease: Constitutional obesity
Constitutional obesity
0.030 GeneticVariation disease BEFREE The interaction enhances the efficiency by which AMPK phosphorylates TBC1D1 on its key regulatory site, Ser<sup>237</sup> Furthermore, the interaction is reduced by a naturally occurring R125W mutation in the PTB1 domain of TBC1D1, previously found to be associated with severe familial obesity in females, with a concomitant reduction in Ser<sup>237</sup> phosphorylation. 30135087 2018
CUI: C1281440
Disease: Familial obesity
Familial obesity
0.030 GeneticVariation disease BEFREE A non-synonymous polymorphism (rs35859249, p.Arg125Trp) in the N-terminal TBC1D1 phosphotyrosine-binding (PTB) domain has shown a replicated association with familial obesity in women. 23667688 2013
CUI: C2937224
Disease: Constitutional obesity
Constitutional obesity
0.030 GeneticVariation disease BEFREE A non-synonymous polymorphism (rs35859249, p.Arg125Trp) in the N-terminal TBC1D1 phosphotyrosine-binding (PTB) domain has shown a replicated association with familial obesity in women. 23667688 2013
CUI: C1281440
Disease: Familial obesity
Familial obesity
0.030 GeneticVariation disease BEFREE These results confirm a putative role of TBC1D1 R125W variant in familial obesity predisposition. 18325908 2008