Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs25531
rs25531
Entrez Id: 6532;105371720
Gene Symbol: SLC6A4;LOC105371720
SLC6A4;LOC105371720
CUI: C0028768
Disease:
Obsessive-Compulsive Disorder
0.050 GeneticVariation BEFREE The present study investigated the possible correlation of SLC6A4 polymorphisms (5-HTTLPR, rs25532, rs25531) in Iranian OCD patients considering gender, age of onset, family history of psychiatric disorders, obsessive and compulsive subtypes and severities. 28691545 2018
dbSNP: rs25531
rs25531
Entrez Id: 6532;105371720
Gene Symbol: SLC6A4;LOC105371720
SLC6A4;LOC105371720
CUI: C0028768
Disease:
Obsessive-Compulsive Disorder
0.050 GeneticVariation BEFREE The higher expressing 5-HTTLPR/rs25531 LA allele was more prevalent in TD probands than in controls (χ(2)  = 5.75; P = 0.017; odds ratio [OR], 1.35); and, in a secondary analysis, surprisingly, it was significantly more frequent in probands who had TD alone than in those who had TD plus OCD (Fisher's exact test; P = 0.0006; OR, 2.29). 23630162 2013
dbSNP: rs25531
rs25531
Entrez Id: 6532;105371720
Gene Symbol: SLC6A4;LOC105371720
SLC6A4;LOC105371720
CUI: C0028768
Disease:
Obsessive-Compulsive Disorder
0.050 GeneticVariation BEFREE A noteworthy lack of association at the LPR, LPR-rs25531 and rare 425V variants suggests that hypotheses about OCD risk need revision to accommodate these new findings, including a possible gender effect. 19806148 2011
dbSNP: rs25531
rs25531
Entrez Id: 6532;105371720
Gene Symbol: SLC6A4;LOC105371720
SLC6A4;LOC105371720
CUI: C0028768
Disease:
Obsessive-Compulsive Disorder
0.050 GeneticVariation BEFREE No significant association of OCD with the 5-HTTLPR genotype was found even on inclusion of the rs25531 locus, which is part of the transcription factor binding site as reported in earlier studies. 21245616 2010
dbSNP: rs25531
rs25531
Entrez Id: 6532;105371720
Gene Symbol: SLC6A4;LOC105371720
SLC6A4;LOC105371720
CUI: C0028768
Disease:
Obsessive-Compulsive Disorder
0.050 GeneticVariation BEFREE Subgroups based on the age of OCD onset, gender, familiality, factor analysis-derived symptom dimensions, or comorbidity with other psychiatric disorders failed to identify SLC6A4- or BDNF-associated phenotypes, with one exception of overall number of comorbid anxiety disorders being significantly associated with 5-HTTLPR/rs25531. 17375136 2007
dbSNP: rs25532
rs25532
Entrez Id: 6532;105371720
Gene Symbol: SLC6A4;LOC105371720
SLC6A4;LOC105371720
CUI: C0028768
Disease:
Obsessive-Compulsive Disorder
0.030 GeneticVariation BEFREE There was no association between rs25532 or rs16965628 and OCD. 29102815 2018
dbSNP: rs25532
rs25532
Entrez Id: 6532;105371720
Gene Symbol: SLC6A4;LOC105371720
SLC6A4;LOC105371720
CUI: C0028768
Disease:
Obsessive-Compulsive Disorder
0.030 GeneticVariation BEFREE Likewise, the higher expressing LAC haplotype (5-HTTLPR/rs25531/rs25532) was more frequent in TD probands than in controls (P = 0.024; OR, 1.33) and also in the TD alone group versus the TD plus OCD group (P = 0.0013; OR, 2.14). 23630162 2013
dbSNP: rs25532
rs25532
Entrez Id: 6532;105371720
Gene Symbol: SLC6A4;LOC105371720
SLC6A4;LOC105371720
CUI: C0028768
Disease:
Obsessive-Compulsive Disorder
0.030 GeneticVariation BEFREE Haplotype-based testing of rs25532 and all other known non-coding functional SLC6A4 variants revealed a highly significant omnibus association with OCD in a large case-control sample. 18055562 2008
dbSNP: rs16965628
rs16965628
Entrez Id: 6532
Gene Symbol: SLC6A4
SLC6A4
CUI: C0028768
Disease:
Obsessive-Compulsive Disorder
0.020 GeneticVariation BEFREE There was no association between rs25532 or rs16965628 and OCD. 29102815 2018
dbSNP: rs16965628
rs16965628
Entrez Id: 6532
Gene Symbol: SLC6A4
SLC6A4
CUI: C0028768
Disease:
Obsessive-Compulsive Disorder
0.020 GeneticVariation BEFREE On the other hand, combined genotypes of SLC6A4 rs16965628 GG+GC were found to be risk fac</span>tors for OCD development (p=0.02, OR=3.464; 95% CI 1.214-9.883) in logistic regression analysis adjusted for age and gender. 25751280 2015
dbSNP: rs28914832
rs28914832
Entrez Id: 6532
Gene Symbol: SLC6A4
SLC6A4
CUI: C0028768
Disease:
Obsessive-Compulsive Disorder
0.020 GeneticVariation BEFREE Thus, the cumulative count of SERT I425V becomes 1.57% in OCD/TD spectrum conditions versus 0.15% in controls, with a recalculated, family-adjusted significance of χ(2) = 15.03 (P < 0.0001; OR, 9.0; total worldwide genotyped, 2914). 23630162 2013
dbSNP: rs28914832
rs28914832
Entrez Id: 6532
Gene Symbol: SLC6A4
SLC6A4
CUI: C0028768
Disease:
Obsessive-Compulsive Disorder
0.020 GeneticVariation BEFREE Similarly, three individuals (two with OCD/OCPD) carried the rare I425V SLC6A4 variant, but none of them passed it on to their six OCD-affected offspring, suggesting that it is unlikely to be solely responsible for the 'OCD plus syndrome', as reported by Ozaki et al. 19806148 2011