PSCA, prostate stem cell antigen, 8000

N. diseases: 111; N. variants: 14
Source: ALL
Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs10216533
rs10216533
Entrez Id: 8000
Gene Symbol: PSCA
PSCA
CUI: C0278701
Disease:
Gastric Adenocarcinoma
0.010 GeneticVariation BEFREE Two SNPs of rs2294008 (C>T) and rs2976392 (G>A) were identified to be associated with GAC risk. rs2294008, rs2976392 and rs10216533 made up two statistically significant haplotypes (Hap-CGG and Hap-TAG). 26006239 2015
dbSNP: rs1045531
rs1045531
Entrez Id: 8000
Gene Symbol: PSCA
PSCA
CUI: C0376358
Disease:
Malignant neoplasm of prostate
0.020 GeneticVariation BEFREE Men with the rs1045531 AA genotype of PSCA were at higher risk for prostate cancer. 21497359 2011
dbSNP: rs1045531
rs1045531
Entrez Id: 8000
Gene Symbol: PSCA
PSCA
CUI: C0376358
Disease:
Malignant neoplasm of prostate
0.020 GeneticVariation BEFREE Men with the rs1045531 AC genotype of prostate stem cell antigen were at higher risk of prostate cancer in Chinese patients undergoing prostate biopsy. 29332451 2017
dbSNP: rs1045531
rs1045531
Entrez Id: 8000
Gene Symbol: PSCA
PSCA
CUI: C0600139
Disease:
Prostate carcinoma
0.020 GeneticVariation BEFREE Men with the rs1045531 AC genotype of prostate stem cell antigen were at higher risk of prostate cancer in Chinese patients undergoing prostate biopsy. 29332451 2017
dbSNP: rs1045531
rs1045531
Entrez Id: 8000
Gene Symbol: PSCA
PSCA
CUI: C0600139
Disease:
Prostate carcinoma
0.020 GeneticVariation BEFREE Men with the rs1045531 AA genotype of PSCA were at higher risk for prostate cancer. 21497359 2011
dbSNP: rs1045531
rs1045531
Entrez Id: 8000
Gene Symbol: PSCA
PSCA
CUI: C1704272
Disease:
Benign Prostatic Hyperplasia
0.010 GeneticVariation BEFREE Statistically significant differences in the distribution of the rs1045531 genotypes and alleles were found between prostate cancer and benign prostatic hyperplasia in patients undergoing prostate biopsy ( P = .035 and .046, respectively). 29332451 2017
dbSNP: rs1045574
rs1045574
Entrez Id: 8000
Gene Symbol: PSCA
PSCA
CUI: C0013295
Disease:
Duodenal Ulcer
0.700 GeneticVariation GWASDB A genome-wide association study identifies two susceptibility loci for duodenal ulcer in the Japanese population. 22387998 2012
dbSNP: rs138377917
rs138377917
Entrez Id: 8000
Gene Symbol: PSCA
PSCA
CUI: C0005684
Disease:
Malignant neoplasm of urinary bladder
0.010 GeneticVariation BEFREE Cumulative evidence of an association was graded as strong for rs2294008 [odds ratio (OR) = 1.32, P = 5.1 × 10-33], rs2976392 (OR = 1.29, P = 1.8 × 10-8), rs9297976 (OR = 0.75, P = 1.4 × 10-7), rs2976391 (OR = 1.38, P = 6.1 × 10-5) and rs138377917 (OR = 0.53, P = 0.008) with gastric cancer, rs2294008 with bladder cancer (OR = 1.15, P = 8.0 × 10-19), gastritis (OR = 1.35, P = 1.2 × 10-5), duodenal ulcer (OR = 0.68, P = 2.4 × 10-57) and gastric ulcer (OR = 0.88, P = 1.7 × 10-7). 30407486 2019
dbSNP: rs138377917
rs138377917
Entrez Id: 8000
Gene Symbol: PSCA
PSCA
CUI: C0017152
Disease:
Gastritis
0.010 GeneticVariation BEFREE Cumulative evidence of an association was graded as strong for rs2294008 [odds ratio (OR) = 1.32, P = 5.1 × 10-33], rs2976392 (OR = 1.29, P = 1.8 × 10-8), rs9297976 (OR = 0.75, P = 1.4 × 10-7), rs2976391 (OR = 1.38, P = 6.1 × 10-5) and rs138377917 (OR = 0.53, P = 0.008) with gastric cancer, rs2294008 with bladder cancer (OR = 1.15, P = 8.0 × 10-19), gastritis (OR = 1.35, P = 1.2 × 10-5), duodenal ulcer (OR = 0.68, P = 2.4 × 10-57) and gastric ulcer (OR = 0.88, P = 1.7 × 10-7). 30407486 2019
dbSNP: rs138377917
rs138377917
Entrez Id: 8000
Gene Symbol: PSCA
PSCA
CUI: C0699885
Disease:
Carcinoma of bladder
0.010 GeneticVariation BEFREE Cumulative evidence of an association was graded as strong for rs2294008 [odds ratio (OR) = 1.32, P = 5.1 × 10-33], rs2976392 (OR = 1.29, P = 1.8 × 10-8), rs9297976 (OR = 0.75, P = 1.4 × 10-7), rs2976391 (OR = 1.38, P = 6.1 × 10-5) and rs138377917 (OR = 0.53, P = 0.008) with gastric cancer, rs2294008 with bladder cancer (OR = 1.15, P = 8.0 × 10-19), gastritis (OR = 1.35, P = 1.2 × 10-5), duodenal ulcer (OR = 0.68, P = 2.4 × 10-57) and gastric ulcer (OR = 0.88, P = 1.7 × 10-7). 30407486 2019
dbSNP: rs138377917
rs138377917
Entrez Id: 8000
Gene Symbol: PSCA
PSCA
CUI: C0013295
Disease:
Duodenal Ulcer
0.010 GeneticVariation BEFREE Cumulative evidence of an association was graded as strong for rs2294008 [odds ratio (OR) = 1.32, P = 5.1 × 10-33], rs2976392 (OR = 1.29, P = 1.8 × 10-8), rs9297976 (OR = 0.75, P = 1.4 × 10-7), rs2976391 (OR = 1.38, P = 6.1 × 10-5) and rs138377917 (OR = 0.53, P = 0.008) with gastric cancer, rs2294008 with bladder cancer (OR = 1.15, P = 8.0 × 10-19), gastritis (OR = 1.35, P = 1.2 × 10-5), duodenal ulcer (OR = 0.68, P = 2.4 × 10-57) and gastric ulcer (OR = 0.88, P = 1.7 × 10-7). 30407486 2019
dbSNP: rs138377917
rs138377917
Entrez Id: 8000
Gene Symbol: PSCA
PSCA
CUI: C0005695
Disease:
Bladder Neoplasm
0.010 GeneticVariation BEFREE Cumulative evidence of an association was graded as strong for rs2294008 [odds ratio (OR) = 1.32, P = 5.1 × 10-33], rs2976392 (OR = 1.29, P = 1.8 × 10-8), rs9297976 (OR = 0.75, P = 1.4 × 10-7), rs2976391 (OR = 1.38, P = 6.1 × 10-5) and rs138377917 (OR = 0.53, P = 0.008) with gastric cancer, rs2294008 with bladder cancer (OR = 1.15, P = 8.0 × 10-19), gastritis (OR = 1.35, P = 1.2 × 10-5), duodenal ulcer (OR = 0.68, P = 2.4 × 10-57) and gastric ulcer (OR = 0.88, P = 1.7 × 10-7). 30407486 2019
dbSNP: rs2294008
rs2294008
Entrez Id: 8000;8629
Gene Symbol: PSCA;JRK
PSCA;JRK
CUI: C0013295
Disease:
Duodenal Ulcer
0.860 GeneticVariation BEFREE Recently, three genome-wide association studies have identified the PSCA (prostate stem cell antigen) rs2294008 polymorphism (C > T) associated with susceptibility to gastric cancer, bladder cancer, and duodenal ulcers, highlighting its critical role in disease pathogenesis. 27001215 2016
dbSNP: rs2294008
rs2294008
Entrez Id: 8000;8629
Gene Symbol: PSCA;JRK
PSCA;JRK
CUI: C0013295
Disease:
Duodenal Ulcer
0.860 GeneticVariation BEFREE The T allele of rs2294008 encodes a translation initiation codon upstream of the reported site and changes protein localization from the cytoplasm to the cell surface. rs505922 at ABO was also associated with duodenal ulcer in a recessive model (OR = 1.32; P = 1.15 × 10(-10)). 22387998 2012
dbSNP: rs2294008
rs2294008
Entrez Id: 8000;8629
Gene Symbol: PSCA;JRK
PSCA;JRK
CUI: C0013295
Disease:
Duodenal Ulcer
C 0.860 GeneticVariation GWASCAT The T allele of rs2294008 encodes a translation initiation codon upstream of the reported site and changes protein localization from the cytoplasm to the cell surface. rs505922 at ABO was also associated with duodenal ulcer in a recessive model (OR = 1.32; P = 1.15 × 10(-10)). 22387998 2012
dbSNP: rs2294008
rs2294008
Entrez Id: 8000;8629
Gene Symbol: PSCA;JRK
PSCA;JRK
CUI: C0013295
Disease:
Duodenal Ulcer
0.860 GeneticVariation BEFREE Frequency of PSCA rs2294008 C/C genotype in duodenal ulcer was 36.1%, which was significantly higher than those with gastric cancer (12.4%), gastric ulcer (19.0%), gastritis (10.7%), and H. pylori-negatives (19.5%) (p < .001). 25582162 2015
dbSNP: rs2294008
rs2294008
Entrez Id: 8000;8629
Gene Symbol: PSCA;JRK
PSCA;JRK
CUI: C0013295
Disease:
Duodenal Ulcer
0.860 GeneticVariation BEFREE Genomic DNA from 603 Spanish patients with primary GC, 139 with DU and 675 healthy controls was typed for the PSCA rs2294008C>T polymorphism by PCR-TaqMan assays. 25721731 2015
dbSNP: rs2294008
rs2294008
Entrez Id: 8000;8629
Gene Symbol: PSCA;JRK
PSCA;JRK
CUI: C0013295
Disease:
Duodenal Ulcer
0.860 GeneticVariation BEFREE Cumulative evidence of an association was graded as strong for rs2294008 [odds ratio (OR) = 1.32, P = 5.1 × 10-33], rs2976392 (OR = 1.29, P = 1.8 × 10-8), rs9297976 (OR = 0.75, P = 1.4 × 10-7), rs2976391 (OR = 1.38, P = 6.1 × 10-5) and rs138377917 (OR = 0.53, P = 0.008) with gastric cancer, rs2294008 with bladder cancer (OR = 1.15, P = 8.0 × 10-19), gastritis (OR = 1.35, P = 1.2 × 10-5), duodenal ulcer (OR = 0.68, P = 2.4 × 10-57) and gastric ulcer (OR = 0.88, P = 1.7 × 10-7). 30407486 2019
dbSNP: rs2294008
rs2294008
Entrez Id: 8000;8629
Gene Symbol: PSCA;JRK
PSCA;JRK
CUI: C0013295
Disease:
Duodenal Ulcer
0.860 GeneticVariation BEFREE Our study confirms an association between the PSCA rs2294008 C-allele and the risk of DU in a Japanese population. 31839644 2019
dbSNP: rs2294008
rs2294008
Entrez Id: 8000;8629
Gene Symbol: PSCA;JRK
PSCA;JRK
CUI: C0013295
Disease:
Duodenal Ulcer
C 0.860 GeneticVariation GWASDB The T allele of rs2294008 encodes a translation initiation codon upstream of the reported site and changes protein localization from the cytoplasm to the cell surface. rs505922 at ABO was also associated with duodenal ulcer in a recessive model (OR = 1.32; P = 1.15 × 10(-10)). 22387998 2012
dbSNP: rs2294008
rs2294008
Entrez Id: 8000;8629
Gene Symbol: PSCA;JRK
PSCA;JRK
CUI: C0013295
Disease:
Duodenal Ulcer
0.860 GeneticVariation BEFREE From these results we conclude that the PSCA rs2294008 polymorphism is involved in the susceptibility to GC and DU, as well as in the prognosis of the diffuse-type of GC in Caucasians. 25721731 2015
dbSNP: rs2294008
rs2294008
Entrez Id: 8000;8629
Gene Symbol: PSCA;JRK
PSCA;JRK
CUI: C0699791
Disease:
Stomach Carcinoma
0.800 GeneticVariation BEFREE PSCA rs2294008/rs2976392 showed a significant, multiplicative interaction with H. pylori infection in risk of GC. 28220687 2017
dbSNP: rs2294008
rs2294008
Entrez Id: 8000;8629
Gene Symbol: PSCA;JRK
PSCA;JRK
CUI: C0699791
Disease:
Stomach Carcinoma
0.800 GeneticVariation BEFREE Recently, two genome-wide association studies identified a significant association between the prostate stem cell antigen (PSCA) rs2294008 (C>T) polymorphism and risk of diffuse-type of gastric cancer in Asians and bladder cancer in Caucasians, respectively. 20083643 2010
dbSNP: rs2294008
rs2294008
Entrez Id: 8000;8629
Gene Symbol: PSCA;JRK
PSCA;JRK
CUI: C0005684
Disease:
Malignant neoplasm of urinary bladder
0.800 GeneticVariation BEFREE Based on the statistical evidence, we can draw a conclusion that the rs2294008 polymorphism of PSCA gene is likely to play a role in cancer carcinogenesis, especially in gastric cancer and bladder cancer. 26308216 2015
dbSNP: rs2294008
rs2294008
Entrez Id: 8000;8629
Gene Symbol: PSCA;JRK
PSCA;JRK
CUI: C0699791
Disease:
Stomach Carcinoma
0.800 GeneticVariation BEFREE The two loci of PSCA (rs2294008 and rs2976392) were both significantly associated with GC susceptibility and in linkage disequilibrium. 22426141 2012