Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 27031
Gene Symbol: NPHP3
NPHP3
0.120 CausalMutation disease CLINVAR Loss of nephrocystin-3 function can cause embryonic lethality, Meckel-Gruber-like syndrome, situs inversus, and renal-hepatic-pancreatic dysplasia. 18371931 2008
Entrez Id: 27031
Gene Symbol: NPHP3
NPHP3
0.120 GeneticVariation disease BEFREE In humans, we show that NPHP3 mutations can cause a broad clinical spectrum of early embryonic patterning defects comprising situs inversus, polydactyly, central nervous system malformations, structural heart defects, preauricular fistulas, and a wide range of congenital anomalies of the kidney and urinary tract (CAKUT). 18371931 2008
Entrez Id: 100532724
Gene Symbol: NPHP3-ACAD11
NPHP3-ACAD11
0.100 CausalMutation disease CLINVAR Characterizing the morbid genome of ciliopathies. 27894351 2016
Entrez Id: 100532724
Gene Symbol: NPHP3-ACAD11
NPHP3-ACAD11
0.100 CausalMutation disease CLINVAR Identification of a gene for renal-hepatic-pancreatic dysplasia by microarray-based homozygosity mapping. 20007846 2010
Entrez Id: 100532724
Gene Symbol: NPHP3-ACAD11
NPHP3-ACAD11
0.100 CausalMutation disease CLINVAR Loss of nephrocystin-3 function can cause embryonic lethality, Meckel-Gruber-like syndrome, situs inversus, and renal-hepatic-pancreatic dysplasia. 18371931 2008
Entrez Id: 56171
Gene Symbol: DNAH7
DNAH7
0.100 CausalMutation disease CLINVAR
Entrez Id: 7469
Gene Symbol: NELFA
NELFA
0.100 Biomarker disease HPO
Entrez Id: 7468
Gene Symbol: NSD2
NSD2
0.100 Biomarker disease HPO
Entrez Id: 72
Gene Symbol: ACTG2
ACTG2
0.100 Biomarker disease HPO
Entrez Id: 55997
Gene Symbol: CFC1
CFC1
0.100 Biomarker disease HPO
Entrez Id: 3954
Gene Symbol: LETM1
LETM1
0.100 Biomarker disease HPO
Entrez Id: 1234
Gene Symbol: CCR5
CCR5
0.050 Biomarker disease BEFREE This review details emerging data indicating that in multiple natural host species, CCR5 is dispensable for SIV infection ex vivo and/or in vivo and, contrary to the established dogma, alternative coreceptors, particularly CXCR6, play a central role in infection and cell targeting. 29173179 2018
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.050 Biomarker disease BEFREE Concentrations of biomarkers of acute and chronic inflammation such as soluble CD14, CXCL10, IL-6 and TNF-α are known to be elevated following SIV infection of young adult macaques of several species, but concentrations of these biomarkers did not shift after SIV infection in aged RM-Ch and remained similar to mock-infected macaques. 29391069 2018
Entrez Id: 3700
Gene Symbol: ITIH4
ITIH4
0.050 Biomarker disease BEFREE Select gp120 V2 domain specific antibodies derived from HIV and SIV infection and vaccination inhibit gp120 binding to α4β7. 30153309 2018
Entrez Id: 3700
Gene Symbol: ITIH4
ITIH4
0.050 Biomarker disease BEFREE In this study, we demonstrate that SIV-infected AGMs, which are the natural hosts of SIV, exhibited high plasma linear V2-specific IgG binding responses that arose concurrently with SIV Env gp120-directed ADCC-mediating, and SIV-infected cell plasma IgG binding responses during acute SIV infection, which were not present in acutely SIV-infected RMs. 29523166 2018
Entrez Id: 1234
Gene Symbol: CCR5
CCR5
0.050 Biomarker disease BEFREE In conclusion, in spite of apparent effective CCR5 blockade in infant RMs, MVC had a marginal impact on acquisition and only a minimal impact on the postinfection delay of viremia following oral SIV infection. 29925666 2018
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.050 Biomarker disease BEFREE We observed an increase in hepatic macrophages during untreated SIV infection that was associated with a number of inflammatory and fibrosis mediators (TNFα, CCL3, TGFβ). 29466439 2018
Entrez Id: 3700
Gene Symbol: ITIH4
ITIH4
0.050 Biomarker disease BEFREE Although HIV/SIV infections result in the abundant production of CD4-induced (CD4i) antibodies (Abs), these Abs are not protective due to steric restrictions following gp120 binding to CD4 on target cells. 28366604 2017
Entrez Id: 1234
Gene Symbol: CCR5
CCR5
0.050 Biomarker disease BEFREE We show that ex vivo SIV infection of lymphocytes from CCR5 wild-type SM is mediated by both CXCR6 and CCR5. 26109719 2015
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.050 Biomarker disease BEFREE Influenza-specific memory CD8(+) T-cell response maintained a highly functional profile in terms of multitude of effector molecule expression (CD107a, IFN-γ, TNF-α, MIP-1β and IL-2) and showed high avidity even in the setting of SIV infection. 22403659 2012
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.050 Biomarker disease BEFREE These data demonstrate an association between nonpathogenic SIV infection of SM and a reduced monocyte TNF-α response to LPS, and they identify a role for monocytes in contributing to the suppressed chronic immune activation observed in these natural hosts. 22553338 2012
Entrez Id: 1234
Gene Symbol: CCR5
CCR5
0.050 AlteredExpression disease BEFREE Our data suggest a model where i) very low levels of CCR5 are sufficient for efficient SIV infection, ii) CCR5 levels above this threshold do not enhance infection, and iii) low level infection can occur in the absence of CCR5. 21035160 2011
Entrez Id: 3700
Gene Symbol: ITIH4
ITIH4
0.050 Biomarker disease BEFREE We also demonstrate that SHIV-KB9 gp120 influences functional T cell responses during SHIV infection in a manner that suppresses degranulation and cytokine secretion by CTLs. 18832708 2008
Entrez Id: 3700
Gene Symbol: ITIH4
ITIH4
0.050 Biomarker disease BEFREE Recombinant modified vaccinia virus ankara expressing the surface gp120 of simian immunodeficiency virus (SIV) primes for a rapid neutralizing antibody response to SIV infection in macaques. 10684319 2000
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.050 Biomarker disease BEFREE In addition, Mphis from monkeys infected with M. avium during late-stage SIV disease produced less TNF-alpha when stimulated with virulent M. avium. 10194069 1999