Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 4204
Gene Symbol: MECP2
MECP2
0.140 GeneticVariation disease BEFREE Male patients with large duplications of the methyl CpG-binding protein 2 (MECP2) gene have been identified with a characteristic phenotype consisting of infantile hypotonia replaced by spasticity, developmental delay, severe mental retardation and recurrent respiratory infections. 21821449 2012
Entrez Id: 4204
Gene Symbol: MECP2
MECP2
0.140 GeneticVariation disease BEFREE Duplications leading to functional disomy of chromosome Xq28, including MECP2 as the critical dosage-sensitive gene, are associated with a distinct clinical phenotype in males, characterized by severe mental retardation, infantile hypotonia, progressive neurologic impairment, recurrent infections, bladder dysfunction, and absent speech. 22522176 2012
Entrez Id: 4204
Gene Symbol: MECP2
MECP2
0.140 GeneticVariation disease BEFREE Duplication of MECP2 causes a recently described X-linked mental retardation syndrome, of which the typical features are infantile hypotonia, poor speech development, recurrent infections, epilepsy, and progressive spasticity. 23248047 2012
Entrez Id: 259232
Gene Symbol: NALCN
NALCN
0.050 GeneticVariation disease BEFREE Biallelic mutations in NALCN are responsible for infantile hypotonia with psychomotor retardation and characteristic facies 1 (IHPRF1). 29968795 2018
Entrez Id: 259232
Gene Symbol: NALCN
NALCN
0.050 GeneticVariation disease BEFREE Importantly, NALCN mutations lead to complex neurodevelopmental syndromes, including infantile hypotonia with psychomotor retardation and characteristic facies (IHPRF) and congenital contractures of limbs and face, hypotonia and developmental delay (CLIFAHDD), which are recessively and dominantly inherited, respectively. 31409833 2019
Entrez Id: 259232
Gene Symbol: NALCN
NALCN
0.050 GeneticVariation disease BEFREE Loss-of-function mutations of NALCN cause infantile hypotonia with psychomotor retardation and characteristic facies (IHPRF). 26708751 2016
Entrez Id: 259232
Gene Symbol: NALCN
NALCN
0.050 GeneticVariation disease BEFREE So far, biallelic NALCN and UNC80 variants have been described in a small number of individuals leading to infantile hypotonia, psychomotor retardation, and characteristic facies 1 (IHPRF1, OMIM 615419) and 2 (IHPRF2, OMIM 616801), respectively. 30167850 2018
Entrez Id: 285175
Gene Symbol: UNC80
UNC80
0.040 GeneticVariation disease BEFREE Biallelic UNC80 mutations caused infantile hypotonia with psychomotor retardation and characteristic facies 2 in two Chinese patients with variable phenotypes. 29572195 2018
Entrez Id: 285175
Gene Symbol: UNC80
UNC80
0.040 GeneticVariation disease BEFREE So far, biallelic NALCN and UNC80 variants have been described in a small number of individuals leading to infantile hypotonia, psychomotor retardation, and characteristic facies 1 (IHPRF1, OMIM 615419) and 2 (IHPRF2, OMIM 616801), respectively. 30167850 2018
Entrez Id: 285175
Gene Symbol: UNC80
UNC80
0.040 GeneticVariation disease BEFREE Patient 2 was compound heterozygous for two novel mutations, c.3226C>T (p.Arg1076Ter) and c.3205C>T (p.Arg1069Ter), in UNC80, a known gene of infantile hypotonia with psychomotor retardation and characteristic facies-2 (IHPRF2). 30771478 2019
Entrez Id: 285175
Gene Symbol: UNC80
UNC80
0.040 GeneticVariation disease BEFREE In this study, we report on a novel homozygous mutation in UNC80 in a Palestinian-Emirati patient suffering infantile hypotonia with psychomotor retardation and characteristic facies. 29430593 2018
Entrez Id: 6261
Gene Symbol: RYR1
RYR1
0.020 GeneticVariation disease BEFREE First genomic rearrangement of the RYR1 gene associated with an atypical presentation of lethal neonatal hypotonia. 19734047 2009
Entrez Id: 93627
Gene Symbol: TBCK
TBCK
0.020 GeneticVariation disease BEFREE The neurological phenotype of children with TBCK p.R126X mutations, which we call TBCK-encephaloneuronopathy (TBCKE), include congenital hypotonia, progressive motor neuronopathy, leukoencephalopathy, and epilepsy. 29283439 2018
Entrez Id: 9581
Gene Symbol: PREPL
PREPL
0.020 GeneticVariation disease BEFREE With the reports on genomic deletions including at least both SLC3A1 and the neighboured PREPL gene the spectrum of cystinuria mutations and of clinical symptoms could recently be enlarged: patients homozygous for these deletions suffer from a general neonatal hypotonia and growth retardation in addition to cystinuria. 22766003 2012
Entrez Id: 6261
Gene Symbol: RYR1
RYR1
0.020 GeneticVariation disease BEFREE Here we broaden the spectrum of clinical manifestations associated with homozygous/compound heterozygous RYR1 gene variants to include a wide range of manifestations from FADS through neonatal hypotonia to a 35-year-old male with AMC and PhD degree. 30652412 2019
Entrez Id: 4534
Gene Symbol: MTM1
MTM1
0.020 GeneticVariation disease BEFREE An autosomal dominant form of CNM results from mutations in the gene encoding dynamin 2 (DNM2), and loss-of-function mutations in the gene encoding myotubularin (MTM1) result in X-linked CNM (XLCNM, also called myotubular myopathy), which promotes severe neonatal hypotonia and early death. 24569376 2014
Entrez Id: 9581
Gene Symbol: PREPL
PREPL
0.020 GeneticVariation disease BEFREE Homozygous or compound heterozygous loss of PREPL is predicted to cause neonatal hypotonia and severe feeding problems. 21222627 2011
Entrez Id: 8506
Gene Symbol: CNTNAP1
CNTNAP1
0.010 GeneticVariation disease BEFREE Two novel variants in CNTNAP1 in two siblings presenting with congenital hypotonia and hypomyelinating neuropathy. 27782105 2017
Entrez Id: 246329
Gene Symbol: STAC3
STAC3
0.010 GeneticVariation disease BEFREE Horstick et al.(2013) previously reported a homozygous p.Trp284Ser variant in STAC3 as the cause of Native American myopathy (NAM) in 5 Lumbee Native American families with congenital hypotonia and weakness, cleft palate, short stature, ptosis, kyphoscoliosis, talipes deformities, and susceptibility to malignant hyperthermia (MH). 28777491 2017
Entrez Id: 9997
Gene Symbol: SCO2
SCO2
0.010 GeneticVariation disease BEFREE This case provides strong support that SCO2 mutations can result in neonatal hypotonia with an SMA 1 phenotype. 14994243 2004
Entrez Id: 6567
Gene Symbol: SLC16A2
SLC16A2
0.010 GeneticVariation disease BEFREE A novel monocarboxylate transporter 8 gene mutation as a cause of severe neonatal hypotonia and developmental delay. 18166539 2008
Entrez Id: 1139
Gene Symbol: CHRNA7
CHRNA7
0.010 GeneticVariation disease BEFREE Absence of the Transient Receptor Potential Cation Channel, Subfamily M, Member 1 (TRPM1) gene product is proposed as a possible mechanism for the severe visual impairment; absence of CHRNA7 (alpha7-nicotinic receptor subunit) as a cause of the refractory seizures and severe cognitive impairment; and deletion of MTMR10 and/or MTMR15 (encoding myotubularin related proteins) alone or combined with other homozygously deleted genes as a cause for the congenital hypotonia with areflexia. 20425840 2010
Entrez Id: 57731
Gene Symbol: SPTBN4
SPTBN4
0.010 GeneticVariation disease BEFREE Here, we report bi-allelic pathogenic SPTBN4 variants (three homozygous and two compound heterozygous) that cause a severe neurological syndrome that includes congenital hypotonia, intellectual disability, and motor axonal and auditory neuropathy. 29861105 2018
Entrez Id: 4308
Gene Symbol: TRPM1
TRPM1
0.010 GeneticVariation disease BEFREE Absence of the Transient Receptor Potential Cation Channel, Subfamily M, Member 1 (TRPM1) gene product is proposed as a possible mechanism for the severe visual impairment; absence of CHRNA7 (alpha7-nicotinic receptor subunit) as a cause of the refractory seizures and severe cognitive impairment; and deletion of MTMR10 and/or MTMR15 (encoding myotubularin related proteins) alone or combined with other homozygously deleted genes as a cause for the congenital hypotonia with areflexia. 20425840 2010
Entrez Id: 54551
Gene Symbol: MAGEL2
MAGEL2
0.010 GeneticVariation disease BEFREE Patients with MAGEL2 variants shared several features with PWS, such as neonatal hypotonia, poor suck, and obesity; however, there were also unique features, including arthrogryposis and a failure to acquire meaningful words. 31791363 2019