Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 54551
Gene Symbol: MAGEL2
MAGEL2
0.010 GeneticVariation disease BEFREE Patients with MAGEL2 variants shared several features with PWS, such as neonatal hypotonia, poor suck, and obesity; however, there were also unique features, including arthrogryposis and a failure to acquire meaningful words. 31791363 2019
Entrez Id: 1822
Gene Symbol: ATN1
ATN1
0.010 GeneticVariation disease BEFREE To distinguish this subset of affected individuals from the DRPLA diagnosis, we suggest using the term CHEDDA (congenital hypotonia, epilepsy, developmental delay, digit abnormalities) to classify the condition. 30827498 2019
Entrez Id: 3908
Gene Symbol: LAMA2
LAMA2
0.010 Biomarker disease BEFREE MDC1A usually presents as a severe neonatal hypotonia and failure to thrive. 30055037 2018
Entrez Id: 57731
Gene Symbol: SPTBN4
SPTBN4
0.010 GeneticVariation disease BEFREE Here, we report bi-allelic pathogenic SPTBN4 variants (three homozygous and two compound heterozygous) that cause a severe neurological syndrome that includes congenital hypotonia, intellectual disability, and motor axonal and auditory neuropathy. 29861105 2018
Entrez Id: 8506
Gene Symbol: CNTNAP1
CNTNAP1
0.010 GeneticVariation disease BEFREE Two novel variants in CNTNAP1 in two siblings presenting with congenital hypotonia and hypomyelinating neuropathy. 27782105 2017
Entrez Id: 246329
Gene Symbol: STAC3
STAC3
0.010 GeneticVariation disease BEFREE Horstick et al.(2013) previously reported a homozygous p.Trp284Ser variant in STAC3 as the cause of Native American myopathy (NAM) in 5 Lumbee Native American families with congenital hypotonia and weakness, cleft palate, short stature, ptosis, kyphoscoliosis, talipes deformities, and susceptibility to malignant hyperthermia (MH). 28777491 2017
Entrez Id: 51305
Gene Symbol: KCNK9
KCNK9
0.010 Biomarker disease BEFREE Patients with KCNK9 imprinting syndrome demonstrate congenital hypotonia, variable cleft palate, normal MRIs and EEGs, delayed development, and feeding problems. 27151206 2016
Entrez Id: 773
Gene Symbol: CACNA1A
CACNA1A
0.010 Biomarker disease BEFREE Genetic testing of CACNA1A in patients with congenital hypotonia and developmental delay may be warranted. 26739101 2016
Entrez Id: 58
Gene Symbol: ACTA1
ACTA1
0.010 GeneticVariation disease BEFREE We conclude that mutations in ACTA1 can cause pathologic features consistent with myofibrillar myopathy, and mutations in ACTA1 should be considered in patients with severe congenital hypotonia associated with muscle weakness and features of myofibrillar myopathy. 25913210 2015
Entrez Id: 100038247
Gene Symbol: PTLS
PTLS
0.010 Biomarker disease BEFREE Potocki-Lupski syndrome (PTLS, OMIM: 610883) is a microduplication syndrome characterized by infantile hypotonia, failure to thrive, cardiovascular malformations, developmental delay, intellectual disability, and behavior abnormalities, the latter of which can include autism spectrum disorder. 24311450 2014
Entrez Id: 3141
Gene Symbol: HLCS
HLCS
0.010 Biomarker disease BEFREE Hypotonia-cystinuria syndrome (HCS, OMIM606407) is characterized by infantile hypotonia, poor feeding, and growth hormone deficiency. 23794250 2013
Entrez Id: 54205
Gene Symbol: CYCS
CYCS
0.010 Biomarker disease BEFREE Hypotonia-cystinuria syndrome (HCS, OMIM606407) is characterized by infantile hypotonia, poor feeding, and growth hormone deficiency. 23794250 2013
Entrez Id: 6519
Gene Symbol: SLC3A1
SLC3A1
0.010 GeneticVariation disease BEFREE With the reports on genomic deletions including at least both SLC3A1 and the neighboured PREPL gene the spectrum of cystinuria mutations and of clinical symptoms could recently be enlarged: patients homozygous for these deletions suffer from a general neonatal hypotonia and growth retardation in addition to cystinuria. 22766003 2012
Entrez Id: 1139
Gene Symbol: CHRNA7
CHRNA7
0.010 GeneticVariation disease BEFREE Absence of the Transient Receptor Potential Cation Channel, Subfamily M, Member 1 (TRPM1) gene product is proposed as a possible mechanism for the severe visual impairment; absence of CHRNA7 (alpha7-nicotinic receptor subunit) as a cause of the refractory seizures and severe cognitive impairment; and deletion of MTMR10 and/or MTMR15 (encoding myotubularin related proteins) alone or combined with other homozygously deleted genes as a cause for the congenital hypotonia with areflexia. 20425840 2010
Entrez Id: 4308
Gene Symbol: TRPM1
TRPM1
0.010 GeneticVariation disease BEFREE Absence of the Transient Receptor Potential Cation Channel, Subfamily M, Member 1 (TRPM1) gene product is proposed as a possible mechanism for the severe visual impairment; absence of CHRNA7 (alpha7-nicotinic receptor subunit) as a cause of the refractory seizures and severe cognitive impairment; and deletion of MTMR10 and/or MTMR15 (encoding myotubularin related proteins) alone or combined with other homozygously deleted genes as a cause for the congenital hypotonia with areflexia. 20425840 2010
Entrez Id: 54893
Gene Symbol: MTMR10
MTMR10
0.010 GeneticVariation disease BEFREE Absence of the Transient Receptor Potential Cation Channel, Subfamily M, Member 1 (TRPM1) gene product is proposed as a possible mechanism for the severe visual impairment; absence of CHRNA7 (alpha7-nicotinic receptor subunit) as a cause of the refractory seizures and severe cognitive impairment; and deletion of MTMR10 and/or MTMR15 (encoding myotubularin related proteins) alone or combined with other homozygously deleted genes as a cause for the congenital hypotonia with areflexia. 20425840 2010
Entrez Id: 2632
Gene Symbol: GBE1
GBE1
0.010 Biomarker disease BEFREE This case confirms previous observations that GBE deficiency ought to be included in the differential diagnosis of congenital hypotonia and that the phenotype correlates with the 'molecular severity' of the mutation. 20833045 2010
Entrez Id: 22909
Gene Symbol: FAN1
FAN1
0.010 Biomarker disease BEFREE Absence of the Transient Receptor Potential Cation Channel, Subfamily M, Member 1 (TRPM1) gene product is proposed as a possible mechanism for the severe visual impairment; absence of CHRNA7 (alpha7-nicotinic receptor subunit) as a cause of the refractory seizures and severe cognitive impairment; and deletion of MTMR10 and/or MTMR15 (encoding myotubularin related proteins) alone or combined with other homozygously deleted genes as a cause for the congenital hypotonia with areflexia. 20425840 2010
Entrez Id: 6567
Gene Symbol: SLC16A2
SLC16A2
0.010 GeneticVariation disease BEFREE A novel monocarboxylate transporter 8 gene mutation as a cause of severe neonatal hypotonia and developmental delay. 18166539 2008
Entrez Id: 5697
Gene Symbol: PYY
PYY
0.010 AlteredExpression disease BEFREE Abnormal plasma ghrelin and PYY levels compared with controls have been reported for subjects with Prader-Willi syndrome (PWS) which is characterized by infantile hypotonia, poor suck reflex and failure to thrive followed by hyperphagia and marked obesity in early childhood. 15754036 2005
Entrez Id: 9997
Gene Symbol: SCO2
SCO2
0.010 GeneticVariation disease BEFREE This case provides strong support that SCO2 mutations can result in neonatal hypotonia with an SMA 1 phenotype. 14994243 2004
Entrez Id: 3295
Gene Symbol: HSD17B4
HSD17B4
0.010 Biomarker disease BEFREE A survey of the clinical consequences of these defects indicates that defects in the acyl-CoA oxidase and D-BP can produce neonatal hypotonia, seizures in early infancy, retinopathy and progressive neurological dysfunction with leukodystrophy on imaging. 11356171 2001
Entrez Id: 6223
Gene Symbol: RPS19
RPS19
0.010 Biomarker disease BEFREE We report on a boy with congenital pure red blood cell aplasia [Diamond Blackfan anemia (DBA)] and severe congenital hypotonia, macrocephaly, hypertelorism, a broad and tall forehead, medial epicanthus, and facial hypotonia with mouth-breathing and drooling, an affable and out-going personality, and a general psychomotor retardation. 10450869 1999
Entrez Id: 1183
Gene Symbol: CLCN4
CLCN4
0.010 GeneticVariation disease BEFREE X-linked mental retardation with neonatal hypotonia in a French family (MRX15): gene assignment to Xp11.22-Xp21.1. 8826458 1996
Entrez Id: 6261
Gene Symbol: RYR1
RYR1
0.020 GeneticVariation disease BEFREE Here we broaden the spectrum of clinical manifestations associated with homozygous/compound heterozygous RYR1 gene variants to include a wide range of manifestations from FADS through neonatal hypotonia to a 35-year-old male with AMC and PhD degree. 30652412 2019