Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 4311
Gene Symbol: MME
MME
0.020 Biomarker disease BEFREE A total 45 cases of primary central nervous system lymphoma (PCNS)/DLBCL were selected, and immunohistochemistries for CD10, Bcl-6, MUM1, and Ki-67 were performed. 27490760 2018
Entrez Id: 3662
Gene Symbol: IRF4
IRF4
0.030 Biomarker disease BEFREE A total 45 cases of primary central nervous system lymphoma (PCNS)/DLBCL were selected, and immunohistochemistries for CD10, Bcl-6, MUM1, and Ki-67 were performed. 27490760 2018
Entrez Id: 84939
Gene Symbol: PWWP3A
PWWP3A
0.010 Biomarker disease BEFREE A total 45 cases of primary central nervous system lymphoma (PCNS)/DLBCL were selected, and immunohistochemistries for CD10, Bcl-6, MUM1, and Ki-67 were performed. 27490760 2018
Entrez Id: 4615
Gene Symbol: MYD88
MYD88
0.100 GeneticVariation disease BEFREE A well-known example of targeted mutation analysis entails MYD88 p.(L265P) detection, which is present in the majority of Bing Neel syndrome and primary central nervous system lymphoma (PCNSL) patients. 29210102 2018
Entrez Id: 57650
Gene Symbol: CIP2A
CIP2A
0.010 Biomarker disease BEFREE Adding p90 of IAUC30 to p10 of ADC improved the differentiation between PCNSL and GBM (area under the ROC curve [AUC] = 0.886), compared to IAUC30 or ADC alone (AUC = 0.789 and 0.744; P < 0.05 for all).The ICC was 0.96 for p90 of IAUC30. 27436023 2017
Entrez Id: 83987
Gene Symbol: CCDC8
CCDC8
0.010 Biomarker disease BEFREE Adding p90 of IAUC30 to p10 of ADC improved the differentiation between PCNSL and GBM (area under the ROC curve [AUC] = 0.886), compared to IAUC30 or ADC alone (AUC = 0.789 and 0.744; P < 0.05 for all).The ICC was 0.96 for p90 of IAUC30. 27436023 2017
Entrez Id: 821
Gene Symbol: CANX
CANX
0.010 Biomarker disease BEFREE Adding p90 of IAUC30 to p10 of ADC improved the differentiation between PCNSL and GBM (area under the ROC curve [AUC] = 0.886), compared to IAUC30 or ADC alone (AUC = 0.789 and 0.744; P < 0.05 for all).The ICC was 0.96 for p90 of IAUC30. 27436023 2017
Entrez Id: 7037
Gene Symbol: TFRC
TFRC
0.010 Biomarker disease BEFREE Adding p90 of IAUC30 to p10 of ADC improved the differentiation between PCNSL and GBM (area under the ROC curve [AUC] = 0.886), compared to IAUC30 or ADC alone (AUC = 0.789 and 0.744; P < 0.05 for all).The ICC was 0.96 for p90 of IAUC30. 27436023 2017
Entrez Id: 51010
Gene Symbol: EXOSC3
EXOSC3
0.010 Biomarker disease BEFREE Adding p90 of IAUC30 to p10 of ADC improved the differentiation between PCNSL and GBM (area under the ROC curve [AUC] = 0.886), compared to IAUC30 or ADC alone (AUC = 0.789 and 0.744; P < 0.05 for all).The ICC was 0.96 for p90 of IAUC30. 27436023 2017
Entrez Id: 6281
Gene Symbol: S100A10
S100A10
0.010 Biomarker disease BEFREE Adding p90 of IAUC30 to p10 of ADC improved the differentiation between PCNSL and GBM (area under the ROC curve [AUC] = 0.886), compared to IAUC30 or ADC alone (AUC = 0.789 and 0.744; P < 0.05 for all).The ICC was 0.96 for p90 of IAUC30. 27436023 2017
Entrez Id: 930
Gene Symbol: CD19
CD19
0.010 Biomarker disease BEFREE After complete regression of tumors, anti-CD19 CAR T cells remained detectable intracranially and intravascularly for up to 159 d. Collectively, these results demonstrate the great potential of anti-CD19 CAR T cells for the treatment of PCNSL. 31712432 2019
Entrez Id: 27086
Gene Symbol: FOXP1
FOXP1
0.010 AlteredExpression disease BEFREE All 19 PCNSL analyzed by quantitative gene expression analysis showed overexpression of truncated FOXP1 Isoforms 3 and 9 and downregulation of normal-size FOXP1 compared with nonmalignant germinal center B cells, the normal counterpart of PCNSL tumor cells. 19680146 2009
Entrez Id: 4436
Gene Symbol: MSH2
MSH2
0.010 AlteredExpression disease BEFREE All but one PCNSL expressed hMSH2, which among mature B cells selectively stains GC B cells. 9680371 1998
Entrez Id: 4360
Gene Symbol: MRC1
MRC1
0.010 AlteredExpression disease BEFREE Although further studies are needed, these results suggest that MMR protein expression, as well as specific deep locations and cMYC expression, may be a novel prognostic and predictive markers for PCNSL. 28981733 2017
Entrez Id: 4580
Gene Symbol: MTX1
MTX1
0.100 Biomarker disease BEFREE Although HD-MTX therapy is supposed to be effective for patients with MDR-1-negative PCNSL, MTX alone should be avoided in the choice of the anticancer drug for the treatment of MDR-1-positive PCNSL. 15700834 2004
Entrez Id: 5243
Gene Symbol: ABCB1
ABCB1
0.030 Biomarker disease BEFREE Although HD-MTX therapy is supposed to be effective for patients with MDR-1-negative PCNSL, MTX alone should be avoided in the choice of the anticancer drug for the treatment of MDR-1-positive PCNSL. 15700834 2004
Entrez Id: 23158
Gene Symbol: TBC1D9
TBC1D9
0.020 Biomarker disease BEFREE Although HD-MTX therapy is supposed to be effective for patients with MDR-1-negative PCNSL, MTX alone should be avoided in the choice of the anticancer drug for the treatment of MDR-1-positive PCNSL. 15700834 2004
Entrez Id: 974
Gene Symbol: CD79B
CD79B
0.060 Biomarker disease BEFREE Although previous studies have reported the most common mutated genes in PCNSL, including MYD88 and CD79b, our understanding of genetic characterizations in primary CNS lymphomas is limited. 30171453 2018
Entrez Id: 4615
Gene Symbol: MYD88
MYD88
0.100 AlteredExpression disease BEFREE Although this underlines the crucial role of the NFκB pathway in PCNSL, CD79B and MYD88 are at present the only genes mentioned in liquid biopsy analysis. 29891112 2018
Entrez Id: 26011
Gene Symbol: TENM4
TENM4
0.010 GeneticVariation disease BEFREE Among the four most frequently mutated genes was ODZ4 showing protein-changing mutations in 4/9 PCNSL. 25189415 2015
Entrez Id: 1825
Gene Symbol: DSC3
DSC3
0.010 Biomarker disease BEFREE Analysis of the combined permeability and perfusion metrics obtained from a single DSC-MRI acquisition improves the diagnostic value for differentiating PCNSL from glioblastoma in comparison with single-parameter nCBV analysis. 30877463 2019
Entrez Id: 9260
Gene Symbol: PDLIM7
PDLIM7
0.020 Biomarker disease BEFREE BCL-6(+)/LMP-1(-)/BCL-2(-) PCNSL occur both in the presence and in the absence of HIV infection and consistently display a large noncleaved cell morphology. 9680371 1998
Entrez Id: 596
Gene Symbol: BCL2
BCL2
0.060 Biomarker disease BEFREE BCL-6(+)/LMP-1(-)/BCL-2(-) PCNSL occur both in the presence and in the absence of HIV infection and consistently display a large noncleaved cell morphology. 9680371 1998
Entrez Id: 9760
Gene Symbol: TOX
TOX
0.010 PosttranslationalModification disease BEFREE Biallelic inactivation of TOX and PRKCD was recurrently found in PCNSL but not in systemic DLBCL, suggesting a specific role in PCNSL pathogenesis. 25991819 2015
Entrez Id: 5580
Gene Symbol: PRKCD
PRKCD
0.010 Biomarker disease BEFREE Biallelic inactivation of TOX and PRKCD was recurrently found in PCNSL but not in systemic DLBCL, suggesting a specific role in PCNSL pathogenesis. 25991819 2015