Source: ALL
Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs11255841
rs11255841
0.010 GeneticVariation BEFREE Moreover, 2 SNPs (rs10795668, rs11255841) in the noncoding LINC00709 gene were significantly associated with a reduced risk of low-risk adenomas in cases (recessive models, OR:0.22, 95%CI:0.06-0.72, and OR:0.08, 95%CI:0.03-0.61) and controls (dominant models, OR:0.50, 95%CI:0.34-0.75, and OR:0.52, 95%CI:0.35-0.78, respectively). 30194776

2019

dbSNP: rs1535989
rs1535989
0.010 GeneticVariation BEFREE An additional variant associated with advanced adenomas, rs1535989 [minor allele frequency, 0.11; OR, 2.09; 95% confidence interval (CI), 1.50-2.91], also predicted colorectal cancer development in a validation analysis (P = 0.019) using a series of adenoma cases or colorectal cancer (CORGI study) and 3 sets of colorectal cancer cases and controls (Scotland, VQ58, and Australia; N = 9,211). 24084763

2013

dbSNP: rs719725
rs719725
0.010 GeneticVariation BEFREE SNP rs719725 was statistically significantly associated with risk of colorectal cancer in WHI (OR per A allele 1.19; 95% CI, 1.01-1.40; P(trend) = 0.04), marginally associated with adenoma risk in PLCO (OR per A allele 1.11; 95% CI, 0.99-1.25; P(trend) = 0.07), and not associated in DALS and MinnCCS. 20978172

2010

dbSNP: rs3789243
rs3789243
0.020 GeneticVariation BEFREE Using a case-control design, the association between the MDR1 intron 3 G-rs3789243-A polymorphism and the risk of colorectal carcinomas and adenomas in the Norwegian population was assessed in 167 carcinomas, 990 adenomas, and 400 controls. 19250544

2009

dbSNP: rs3789243
rs3789243
0.020 GeneticVariation BEFREE The ABCB1 C-rs3789243-T and NFKB1 -94ins/del homozygous variant genotypes were associated with low ABCB1 mRNA levels in morphologically normal sigmoid tissue from adenoma cases (P<0.05 for both). 23977225

2013

dbSNP: rs104894194
rs104894194
AIP
0.010 GeneticVariation BEFREE However, two out of nine patients with prolactin-producing adenoma were shown to harbor a Finnish founder mutation (Q14X) with a complete loss of the wild-type allele in the tumors. 17914118

2007

dbSNP: rs2276020
rs2276020
0.010 GeneticVariation BEFREE Additionally, a silent polymorphism, D172D (c.516C>T), was found in 3 patients with non-functioning adenoma, in 2 patients with prolactinoma and in one patient with acromegaly. 18484068

2008

dbSNP: rs10941112
rs10941112
0.010 GeneticVariation BEFREE Regular ibuprofen users who were homozygous for the variant allele at either M9V or D175G were at reduced risk for adenoma (both P(interaction) < 0.05). 17684125

2007

dbSNP: rs1800497
rs1800497
0.010 GeneticVariation BEFREE The rs1799732 CT and rs1800497 TT genotypes were significantly associated with adenoma recurrence in the Polyp Prevention Trial. 19065655

2009

dbSNP: rs1801155
rs1801155
APC
0.050 GeneticVariation BEFREE Furthermore, compared with noncarriers, APC I1307K carriers had increased numbers of adenomas and colorectal cancers per patient (P=.03), as well as a younger age at diagnosis. 9973276

1999

dbSNP: rs1801155
rs1801155
APC
0.050 GeneticVariation BEFREE We postulated that some c.3920T>A carriers with multiple adenomas have other unidentified APC germ line or somatic mutations. 24416237

2014

dbSNP: rs1801155
rs1801155
APC
0.050 GeneticVariation BEFREE The characterization of somatic APC mutations in colonic adenomas and carcinomas in Ashkenazi Jews with the APC I1307K variant using linkage disequilibrium. 12533826

2003

dbSNP: rs1801155
rs1801155
APC
0.050 GeneticVariation BEFREE The high frequency of I1307K colorectal cancer patients found in the Ashkenazi Jewish community of Ottawa and the equivalent proportion of carriers and noncarriers who developed adenomatous polyps suggest that in this community, I1307K is associated with a significant predisposition to carcinoma but not adenoma. 11159880

2001

dbSNP: rs1801155
rs1801155
APC
0.050 GeneticVariation BEFREE Furthermore, APC I1307K carriers had greater numbers of adenomas and colorectal cancers per patient than noncarriers. 17854661

2007

dbSNP: rs1463038513
rs1463038513
APC
0.040 GeneticVariation BEFREE Furthermore, APC I1307K carriers had greater numbers of adenomas and colorectal cancers per patient than noncarriers. 17854661

2007

dbSNP: rs1463038513
rs1463038513
APC
0.040 GeneticVariation BEFREE The high frequency of I1307K colorectal cancer patients found in the Ashkenazi Jewish community of Ottawa and the equivalent proportion of carriers and noncarriers who developed adenomatous polyps suggest that in this community, I1307K is associated with a significant predisposition to carcinoma but not adenoma. 11159880

2001

dbSNP: rs1463038513
rs1463038513
APC
0.040 GeneticVariation BEFREE Furthermore, compared with noncarriers, APC I1307K carriers had increased numbers of adenomas and colorectal cancers per patient (P=.03), as well as a younger age at diagnosis. 9973276

1999

dbSNP: rs1463038513
rs1463038513
APC
0.040 GeneticVariation BEFREE The characterization of somatic APC mutations in colonic adenomas and carcinomas in Ashkenazi Jews with the APC I1307K variant using linkage disequilibrium. 12533826

2003

dbSNP: rs1801166
rs1801166
APC
0.020 GeneticVariation BEFREE The risk of harboring adenoma(s) among subjects bearing the E1317Q variant was 1.29 (95% CI 0.09-18.0). 12537656

2002

dbSNP: rs1801166
rs1801166
APC
0.020 GeneticVariation BEFREE In the present study, 608 cases (377 patients with CRC, 145 patients with 4-100 lifetime adenomas, and 86 with < or =3 lifetime ade</span>nomas), and 679 controls (362 spouses and 317 patients with normal colonoscopy) were screened for the APC E1317Q variant. 14578138

2003

dbSNP: rs1268298845
rs1268298845
APC
0.010 GeneticVariation BEFREE A multivariable model showed positive correlation between G396D, Y179C and 1186 ins GG mutations and number of adenomas (OR 8.6, 10.2 and 14.4, respectively). 25822476

2015

dbSNP: rs459552
rs459552
APC
0.010 GeneticVariation BEFREE The genetic association between D1</span>822V</span> and advanced distal adenoma was confined to persons consuming a high-fat diet (P(interaction)=0.03). 20510605

2010

dbSNP: rs17503908
rs17503908
0.010 GeneticVariation BEFREE Among the top findings, an SNP (rs17503908) in ataxia telangiectasia mutated (ATM) was inversely related to adenoma risk (OR = 0.75, 95% CI = 0.63-0.91). 21504893

2011

dbSNP: rs113488022
rs113488022
0.100 GeneticVariation BEFREE BRAF V599E mutation was found in 27 serrated adenomas (77.1%), and KRAS mutations were found in 3 (8.6%) of 35 traditional serrated adenomas. 15991007

2005

dbSNP: rs113488022
rs113488022
0.100 GeneticVariation BEFREE The BRAF V600E mutation is one of the most frequent molecular abnormalities identified in hyperplastic polyps and sessile serrated adenomas. 26030242

2015