Source: ALL
Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs113488022
rs113488022
0.100 GeneticVariation BEFREE Demographics, polyp details (size, site, BRAF((V600E))) and advanced synchronous conventional adenomas were recorded. 22782936

2012

dbSNP: rs113488022
rs113488022
0.100 GeneticVariation BEFREE We investigated 194 serrated lesions of the colon, comprising 42 sessile serrated adenomas/polyps, 16 traditional serrated adenomas, 136 hyperplastic polyps and 20 tubular/tubulovillous adenomas (conventional adenomas) with the novel BRAF V600E mutation-specific antibody VE1. 23887306

2014

dbSNP: rs113488022
rs113488022
0.100 GeneticVariation BEFREE We analyzed 29 gallbladder carcinomas (9 papillary and 20 nonpapillary adenocarcinomas), 16 adenomas (6 pyloric, 3 intestinal, 3 biliary, 3 mixed pyloric-biliary, and 1 mixed pyloric-intestinal), and 5 cases of high-grade dysplasia for activating missense mutations in KRAS codons 12 and 13 and BRAF V600E mutations. 21307665

2011

dbSNP: rs113488022
rs113488022
0.100 GeneticVariation BEFREE Clinicopathological factors associated with BRAF-V600E mutation in colorectal serrated adenomas. 30815911

2019

dbSNP: rs113488022
rs113488022
0.100 GeneticVariation BEFREE These results posit LKB1 haploinsufficiency as a risk factor for tumor progression of BRAF(V600E) mutated lung adenomas in human cancer patients. 23825589

2013

dbSNP: rs113488022
rs113488022
0.100 GeneticVariation BEFREE BRAF V600E mutation analysis was performed in 148 selected cases; mutations were found in 44/49 (90%) of lesions diagnosed as sessile serrated adenoma, in 10/34 (29%) of hyperplastic polyps of microvesicular type, in 4/11 (36%) of traditional serrated adenomas, in 10/10 (100%) of mixed hyperplastic adenomatous polyps, and in 2/42 (5%) of "conventional" adenomas. 19126563

2009

dbSNP: rs113488022
rs113488022
0.100 GeneticVariation BEFREE Synchronous colorectal cancer (HR 1.82; 95% CI 1.15-2.87; P=0.01), synchronous advanced adenoma (HR 1.81; 95% CI 1.27-2.58; P=0.001), and BRAF(c.1799T>A) mutation (HR 2.16; 95% CI 1.25-3.73; P=0.01) were stage-independent predictors of death from MSS CRC. 24434431

2014

dbSNP: rs113488022
rs113488022
0.100 GeneticVariation BEFREE Three cases had a BRAF V600E mutation including the composite tumor, with both the adenoma and carcinoma components showing the same mutation. 26014474

2015

dbSNP: rs113488022
rs113488022
0.100 GeneticVariation BEFREE The findings demonstrated the positive association of the BRAF mutation, V600E, with sessile serrated adenomas and KRAS mutations with tubular adenomas (p < 0.05). 19172291

2009

dbSNP: rs113488022
rs113488022
0.100 GeneticVariation BEFREE The BRAF V600E mutation was detected in 36.3% of SCa and 26.7% of TSA patients, but it was not detected in TA and Ca patients; MSI-H was noticed in 23% of SCa, 33.3% of TSA, 5.3% of Ca and 0% of TA patients, respectively (P<0.05). 21615873

2011

dbSNP: rs121913377
rs121913377
0.100 GeneticVariation BEFREE BRAF V600E mutation analysis was performed in 148 selected cases; mutations were found in 44/49 (90%) of lesions diagnosed as sessile serrated adenoma, in 10/34 (29%) of hyperplastic polyps of microvesicular type, in 4/11 (36%) of traditional serrated adenomas, in 10/10 (100%) of mixed hyperplastic adenomatous polyps, and in 2/42 (5%) of "conventional" adenomas. 19126563

2009

dbSNP: rs121913377
rs121913377
0.100 GeneticVariation BEFREE The findings demonstrated the positive association of the BRAF mutation, V600E, with sessile serrated adenomas and KRAS mutations with tubular adenomas (p < 0.05). 19172291

2009

dbSNP: rs121913377
rs121913377
0.100 GeneticVariation BEFREE Three cases had a BRAF V600E mutation including the composite tumor, with both the adenoma and carcinoma components showing the same mutation. 26014474

2015

dbSNP: rs121913377
rs121913377
0.100 GeneticVariation BEFREE BRAF V599E mutation was found in 27 serrated adenomas (77.1%), and KRAS mutations were found in 3 (8.6%) of 35 traditional serrated adenomas. 15991007

2005

dbSNP: rs121913377
rs121913377
0.100 GeneticVariation BEFREE The BRAF V600E mutation was detected in 36.3% of SCa and 26.7% of TSA patients, but it was not detected in TA and Ca patients; MSI-H was noticed in 23% of SCa, 33.3% of TSA, 5.3% of Ca and 0% of TA patients, respectively (P<0.05). 21615873

2011

dbSNP: rs121913377
rs121913377
0.100 GeneticVariation BEFREE These results posit LKB1 haploinsufficiency as a risk factor for tumor progression of BRAF(V600E) mutated lung adenomas in human cancer patients. 23825589

2013

dbSNP: rs121913377
rs121913377
0.100 GeneticVariation BEFREE Demographics, polyp details (size, site, BRAF((V600E))) and advanced synchronous conventional adenomas were recorded. 22782936

2012

dbSNP: rs121913377
rs121913377
0.100 GeneticVariation BEFREE We analyzed 29 gallbladder carcinomas (9 papillary and 20 nonpapillary adenocarcinomas), 16 adenomas (6 pyloric, 3 intestinal, 3 biliary, 3 mixed pyloric-biliary, and 1 mixed pyloric-intestinal), and 5 cases of high-grade dysplasia for activating missense mutations in KRAS codons 12 and 13 and BRAF V600E mutations. 21307665

2011

dbSNP: rs121913377
rs121913377
0.100 GeneticVariation BEFREE We investigated 194 serrated lesions of the colon, comprising 42 sessile serrated adenomas/polyps, 16 traditional serrated adenomas, 136 hyperplastic polyps and 20 tubular/tubulovillous adenomas (conventional adenomas) with the novel BRAF V600E mutation-specific antibody VE1. 23887306

2014

dbSNP: rs121913377
rs121913377
0.100 GeneticVariation BEFREE The BRAF V600E mutation is one of the most frequent molecular abnormalities identified in hyperplastic polyps and sessile serrated adenomas. 26030242

2015

dbSNP: rs121913377
rs121913377
0.100 GeneticVariation BEFREE Clinicopathological factors associated with BRAF-V600E mutation in colorectal serrated adenomas. 30815911

2019

dbSNP: rs386834263
rs386834263
0.010 GeneticVariation BEFREE A zona glomerulosa-like APA harbored a known CACNA1D G403R somatic mutation, whereas a zona reticularis-like adenoma, which was grossly black in pigmentation with histologic characteristics more associated with cortisol-producing adenomas, expressed CYP11B2, CYP17, and DHEA-ST by immunohistochemistry (IHC) and harbored no known somatic mutations. 28368480

2017

dbSNP: rs3802842
rs3802842
0.010 GeneticVariation BEFREE The CRC SNPs accounted for 4.3% of the variation in multiple adenoma risk, with three SNPs (rs6983267, rs10795668, rs3802842) explaining 3.0% of the variation. 24801760

2015

dbSNP: rs1205
rs1205
CRP
0.020 GeneticVariation BEFREE The C allele of rs1205 and the A allele of rs1130864 were significantly associated with higher serum CRP levels (p (trend): 0.0002 and 0.01, respectively), as well as with a decreased adenoma risk [rs1205: OR for CT and CC vs. TT = 0.69 (95% CI: 0.48-0.98) and 0.53 (0.34-0.83), respectively, p (trend) = 0.008; rs1130864: OR for GA and AA versus GG = 0.65 (0.45-0.93) and 0.74 (0.31-1.76), respectively, p (trend) = 0.04]. 20333461

2010

dbSNP: rs1205
rs1205
CRP
0.020 GeneticVariation BEFREE At rs1205 in CRP, T (minor allele) carriers had a higher risk (OR 1.67, 95%CI 1.07-2.60; reference: CC) of adenomas overall and adenomas with aggressive characteristics. 29802748

2018