Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs1042522
rs1042522
0.100 GeneticVariation BEFREE This study aimed to assess whether polymorphisms in the single-nucleotide polymorphism miR-34b/c T>C (rs4938723) and TP53 Arg72Pro (rs1042522) increase the risk of HCC and influence outcome in patients with HCC. 23632240

2013

dbSNP: rs1042522
rs1042522
0.100 GeneticVariation BEFREE Thus, MDM2 SNP 309 and p53 Arg72Pro are associated with the early development of HCC in Korean patients with chronic HBV infection. 18390844

2008

dbSNP: rs1042522
rs1042522
0.100 GeneticVariation BEFREE The study on p53 Arg72Pro and XRCC1 Arg399Gln polymorphism in HCC patients demonstrated differences in allele frequencies compared to their controls. 23053887

2013

dbSNP: rs1042522
rs1042522
0.100 GeneticVariation BEFREE Meta-analyses of available data suggest an obvious association between the TP53 Arg72Pro and HCC risk in Caucasians. 23167333

2012

dbSNP: rs1042522
rs1042522
0.100 GeneticVariation BEFREE Results indicated that Arg72Pro is associated with higher susceptibility to cancer in some tumor sites, mainly hepatocarcinoma. 20886596

2011

dbSNP: rs1042522
rs1042522
0.100 GeneticVariation BEFREE Our data suggest that Arg72Pro polymorphism in a WT p53 context may act as a primary driver of epigenetic changes in HCC. 25889455

2015

dbSNP: rs1042522
rs1042522
0.100 GeneticVariation BEFREE No publication bias was found for all the meta-analysis as suggested by the Begg funnel plot and Egger tests.These results suggested that variants MDM2 SNP309 and p53 Arg72Pro are susceptibility factors for HCC; however, more studies are warranted to validate the results. 28885338

2017

dbSNP: rs1042522
rs1042522
0.100 GeneticVariation BEFREE Our data shows that the Pro/Pro genotype of the p53 Arg72Pro polymorphism is associated with increased risk of HCC development in this Turkish population (OR = 3.20, 95% CI: 1.24-8.22, P = 0.02). 21607615

2012

dbSNP: rs1042522
rs1042522
0.100 GeneticVariation BEFREE Homozygosity for Pro of p53 Arg72Pro is potentially one of the genetic risk factors for HCC in Chinese population. 15633234

2005

dbSNP: rs1042522
rs1042522
0.100 GeneticVariation BEFREE CG and GG genotypes in rs1042522 and heterozygote and homozygote in rs2279744 were significantly associated with an elevated risk of HCC. 25412941

2014

dbSNP: rs1042522
rs1042522
0.100 GeneticVariation BEFREE However, we did not find any main effect of TP53 Arg72Pro on HCC risk in this population. 20309940

2011

dbSNP: rs1042522
rs1042522
0.100 GeneticVariation BEFREE In addition, our findings further suggest that the combination of MDM2 SNP 309 and TP53 Arg72Pro genotypes confers higher risk to develop HCC. 24376578

2013

dbSNP: rs1042522
rs1042522
0.100 GeneticVariation BEFREE There was no evidence for any association with early age of HCC onset when deleterious alleles of MDM2 SNP309 and TP53 Arg72Pro where present. 22180176

2012

dbSNP: rs1043210477
rs1043210477
0.010 GeneticVariation BEFREE The aim of this study was to assess the role of common variation in three polymorphic genes (MnSOD Ala-9Val, GPX1 Pro198Leu and CAT -262 C > T) coding for antioxidant defence enzymes in modulating individual susceptibility to hepatocellular carcinoma (HCC) using a case-control study (cases = 96 and controls = 222). 19929244

2010

dbSNP: rs1044250
rs1044250
0.010 GeneticVariation BEFREE In human embryonic kidney 293 and human hepatoma 7 cells compared with wild type, E40K and T266M showed significantly altered synthesis and secretion, respectively. 20829508

2010

dbSNP: rs1045411
rs1045411
0.020 GeneticVariation BEFREE Haplotype analysis showed that the T-C-T haplotype (rs1045411-rs2249825-rs1415125) in HMGB1 gene was associated with a 2.47-fold (95% CI: 1.41-4.34; P = 0.002) increased risk of hepatocellular carcinoma compared with the commonest C-C-T haplotype after adjustment. 28187002

2017

dbSNP: rs1045411
rs1045411
0.020 GeneticVariation BEFREE The results showed that HMGB1 SNP rs1045411 with CT or at least one T alleles has lower risk of HCC than wild-type (CC) carriers. 27076788

2016

dbSNP: rs1045642
rs1045642
0.020 GeneticVariation BEFREE Evaluation of the C3435T polymorphism in the MDR1 gene in patients with hepatocellular carcinoma. 23109454

2013

dbSNP: rs1045642
rs1045642
0.020 GeneticVariation BEFREE C1236T genotype may predict changes in pathological features of patients with HCC to a certain extent, and C3435T SNP can be used as one of the prognostic factors of HCC. 30779721

2019

dbSNP: rs1046282
rs1046282
0.010 GeneticVariation BEFREE The results of clinicopathologic analysis showed that A allele at the rs737241 locus could increase the expression level of AFP (P = .007), the rs1046282 mutation C allele could increase the AFP expression level (P = .011), rs4024 locus mutation A allele could reduce the risk of vascular invasion (P = .013), rs3212948 locus mutation T allele could reduce the differentiation of liver cancer (P = .022), rs1046282 locus C allele could reduce the DNA load of hepatitis B virus (P = .035), and rs735482 A allele could increase the tumor size in HCC (P = .037).The SNPs in rs737241 for AFP gene may correlate with the occurrence of HCC. 30946366

2019

dbSNP: rs1047781
rs1047781
0.010 GeneticVariation BEFREE Our study strongly implicates the polymorphic locus rs1047781 of <i>FUT2</i> as being associated with HCC development. 28824326

2017

dbSNP: rs1047840
rs1047840
0.010 GeneticVariation BEFREE Our data shows that the Lys/Lys genotype of the Exo 1 K589E polymorphism is associated with increased risk of HCC development in this Turkish population [odds ratio (OR) = 2.15, 95% confidence interval (CI): 1.13-4.09, P = 0.02]. 22205538

2012

dbSNP: rs1047972
rs1047972
0.020 GeneticVariation BEFREE We found that carriers of the TT allele of the variant rs1047972 were at greater risk of HCC compared with wild-type (CC) carriers. 29333101

2018

dbSNP: rs1047972
rs1047972
0.020 GeneticVariation BEFREE On the contrary, no significant association was found between Val57Ile and HBV-related HCC occurrence. 28903390

2017

dbSNP: rs10484561
rs10484561
0.700 GeneticVariation GWASDB Genetic variants in STAT4 and HLA-DQ genes confer risk of hepatitis B virus-related hepatocellular carcinoma. 23242368

2013