Disease: Celiac Disease
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs11209026
IL23R
0.597 0.680 1 67240275 missense variant G/A snv 4.2E-02 4.6E-02 46
rs11580078
C1orf141 ; IL23R
0.724 0.240 1 67203951 intron variant C/A;G snv 14
rs1217691063
MTHFR
0.330 0.920 1 11796309 missense variant A/G snv 4.0E-06 7.0E-06 614
rs2066363
ADGRL2
0.724 0.240 1 81771892 intron variant C/T snv 0.71 14
rs2476601
AP4B1-AS1 ; PTPN22
0.498 0.800 1 113834946 missense variant A/G snv 0.93 0.93 121
rs2501432
CNR2
0.716 0.480 1 23875430 missense variant T/C;G snv 0.62 16
rs34884278 0.724 0.240 1 172869708 intron variant C/T snv 0.63 14
rs35761398
CNR2
0.701 0.520 1 23875429 missense variant TT/CC mnv 19
rs35829419
NLRP3
0.689 0.560 1 247425556 missense variant C/A snv 3.9E-02 3.3E-02 23
rs55705316 0.724 0.240 1 206760172 regulatory region variant T/A;G snv 14
rs6679677
PHTF1
0.653 0.320 1 113761186 upstream gene variant C/A snv 6.7E-02 26
rs6689858
CRB1
0.724 0.240 1 197406337 intron variant T/C snv 0.39 14
rs879761216
CNR2
0.732 0.480 1 23875429 frameshift variant TT/C;T delins 14
rs114846446
LINC01250
0.724 0.240 2 2944140 intron variant G/A snv 9.5E-03 14
rs1980422 0.776 0.320 2 203745673 intergenic variant C/A;T snv 9
rs2075184 0.724 0.240 2 102464132 intergenic variant T/C snv 0.78 14
rs231775
CTLA4
0.504 0.720 2 203867991 missense variant A/G;T snv 0.42; 4.0E-06 115
rs36001488
ATG16L1
0.724 0.240 2 233276621 intron variant C/T snv 0.44 14
rs4676410
GPR35
0.716 0.240 2 240624322 intron variant G/A snv 0.26 17
rs1464510
LPP
0.807 0.280 3 188394766 intron variant C/A;T snv 9
rs4625
DAG1
0.716 0.280 3 49534707 3 prime UTR variant A/G snv 0.30 17
rs62324212
IL21-AS1
0.724 0.240 4 122639784 intron variant C/A;G snv 15
rs7660520 0.724 0.240 4 182824168 upstream gene variant G/A;C snv 14
rs7672495 0.724 0.240 4 4990640 regulatory region variant T/C snv 0.21 14
rs11741255
IRF1-AS1
0.724 0.240 5 132475490 intron variant G/A snv 0.29 14