Disease: Celiac Disease
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs2075184 0.724 0.240 2 102464132 intergenic variant T/C snv 0.78 14
rs62131887 0.724 0.240 19 10476920 intergenic variant C/T snv 0.37 14
rs11839053 0.724 0.240 13 106410694 intergenic variant T/C snv 7.0E-02 14
rs653178
ATXN2
0.672 0.600 12 111569952 intron variant C/T snv 0.67 41
rs6679677
PHTF1
0.653 0.320 1 113761186 upstream gene variant C/A snv 6.7E-02 26
rs2476601
AP4B1-AS1 ; PTPN22
0.498 0.800 1 113834946 missense variant A/G snv 0.93 0.93 121
rs4246905
TNFSF15
0.716 0.400 9 114790969 missense variant T/A;C snv 0.76 16
rs4986790
TLR4
0.438 0.800 9 117713024 missense variant A/G;T snv 6.1E-02; 4.0E-06 223
rs4986791
TLR4
0.456 0.840 9 117713324 missense variant C/T snv 5.7E-02 4.9E-02 182
rs1217691063
MTHFR
0.330 0.920 1 11796309 missense variant A/G snv 4.0E-06 7.0E-06 614
rs62324212
IL21-AS1
0.724 0.240 4 122639784 intron variant C/A;G snv 15
rs7042370
LURAP1L-AS1 ; LURAP1L
0.724 0.240 9 12785074 intron variant T/C snv 0.58 14
rs10988542
FNBP1
0.724 0.240 9 129894985 intron variant G/A;C snv 14
rs11741255
IRF1-AS1
0.724 0.240 5 132475490 intron variant G/A snv 0.29 14
rs11145763
CARD9
0.724 0.240 9 136369144 intron variant A/C;G;T snv 14
rs2807264 0.724 0.240 X 136583619 downstream gene variant C/A snv 14
rs12863738 0.724 0.240 X 136949968 intron variant C/T snv 0.16 14
rs7831697 0.724 0.240 8 137124061 regulatory region variant T/A;C;G snv 14
rs755374 0.724 0.240 5 159402286 intron variant C/T snv 0.28 14
rs34884278 0.724 0.240 1 172869708 intron variant C/T snv 0.63 14
rs7660520 0.724 0.240 4 182824168 upstream gene variant G/A;C snv 14
rs1464510
LPP
0.807 0.280 3 188394766 intron variant C/A;T snv 9
rs6689858
CRB1
0.724 0.240 1 197406337 intron variant T/C snv 0.39 14
rs1980422 0.776 0.320 2 203745673 intergenic variant C/A;T snv 9
rs231775
CTLA4
0.504 0.720 2 203867991 missense variant A/G;T snv 0.42; 4.0E-06 115