Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 6910
Gene Symbol: TBX5
TBX5
0.060 Biomarker group BEFREE Repression of Hh-signaling through Smo co-mutation in Tbx5 heterozygotes rescued the limb defects, thus placing Tbx5 upstream of Hh-signaling in limb defects. 31373354 2019
Entrez Id: 6910
Gene Symbol: TBX5
TBX5
0.060 AlteredExpression group BEFREE In our mouse model, bilateral hypomorphic levels of Tbx5 produces asymmetric forelimb defects that are consistently more severe in the left limb than the right, phenocopying the left-biased limb defects seen in HOS patients. 27992425 2016
Entrez Id: 6910
Gene Symbol: TBX5
TBX5
0.060 GeneticVariation group BEFREE Autosomal dominant Holt-Oram syndrome (HOS) is caused by mutations in the TBX5 gene and is characterized by congenital heart and preaxial radial ray upper limb defects. 18828908 2008
Entrez Id: 6910
Gene Symbol: TBX5
TBX5
0.060 GeneticVariation group BEFREE TBX5 mutations cause the cardiac and limb defects of the autosomal dominant Holt-Oram syndrome (HOS). 16691575 2006
Entrez Id: 6910
Gene Symbol: TBX5
TBX5
0.060 GeneticVariation group BEFREE Although mutations are found throughout the TBX5 gene, no evidence exists to suggest that genotype affects the location of heart and limb defects or the severity of HOS manifestation. 15096952 2004
Entrez Id: 6910
Gene Symbol: TBX5
TBX5
0.060 GeneticVariation group BEFREE Fewer than 50% of individuals with nonsense or frameshift mutations in TBX5 had heart and limb defects of similar severity, and only 2 of 20 individuals had heart or limb malformations of the severity predicted by the location of their mutations in the T box. 12789647 2003
Entrez Id: 7405
Gene Symbol: UVRAG
UVRAG
0.030 GeneticVariation group BEFREE Ectrodactyly-Ectodermal dysplasia-Clefting (EEC) syndrome is a rare autosomal dominant disease caused by heterozygous mutations in the p63 gene and characterized by limb defects, orofacial clefting, ectodermal dysplasia, and ocular defects. 26891374 2016
Entrez Id: 6121
Gene Symbol: RPE65
RPE65
0.030 GeneticVariation group BEFREE Ectrodactyly-Ectodermal dysplasia-Clefting (EEC) syndrome is a rare autosomal dominant disease caused by heterozygous mutations in the p63 gene and characterized by limb defects, orofacial clefting, ectodermal dysplasia, and ocular defects. 26891374 2016
Entrez Id: 10970
Gene Symbol: CKAP4
CKAP4
0.030 GeneticVariation group BEFREE Ectrodactyly-Ectodermal dysplasia-Clefting (EEC) syndrome is a rare autosomal dominant disease caused by heterozygous mutations in the p63 gene and characterized by limb defects, orofacial clefting, ectodermal dysplasia, and ocular defects. 26891374 2016
Entrez Id: 8626
Gene Symbol: TP63
TP63
0.030 GeneticVariation group BEFREE Ectrodactyly-Ectodermal dysplasia-Clefting (EEC) syndrome is a rare autosomal dominant disease caused by heterozygous mutations in the p63 gene and characterized by limb defects, orofacial clefting, ectodermal dysplasia, and ocular defects. 26891374 2016
Entrez Id: 6121
Gene Symbol: RPE65
RPE65
0.030 GeneticVariation group BEFREE The p63 transcription factor, homolog to the p53 tumor suppressor gene, plays a crucial role in epidermal and limb development, as its mutations are associated to human congenital syndromes characterized by skin, craniofacial and limb defects. 25911675 2015
Entrez Id: 7405
Gene Symbol: UVRAG
UVRAG
0.030 GeneticVariation group BEFREE The p63 transcription factor, homolog to the p53 tumor suppressor gene, plays a crucial role in epidermal and limb development, as its mutations are associated to human congenital syndromes characterized by skin, craniofacial and limb defects. 25911675 2015
Entrez Id: 10970
Gene Symbol: CKAP4
CKAP4
0.030 GeneticVariation group BEFREE The p63 transcription factor, homolog to the p53 tumor suppressor gene, plays a crucial role in epidermal and limb development, as its mutations are associated to human congenital syndromes characterized by skin, craniofacial and limb defects. 25911675 2015
Entrez Id: 8626
Gene Symbol: TP63
TP63
0.030 GeneticVariation group BEFREE The p63 transcription factor, homolog to the p53 tumor suppressor gene, plays a crucial role in epidermal and limb development, as its mutations are associated to human congenital syndromes characterized by skin, craniofacial and limb defects. 25911675 2015
Entrez Id: 6121
Gene Symbol: RPE65
RPE65
0.030 GeneticVariation group BEFREE Mutations in the transcription factor p63 have been linked to several syndromes characterized by ectodermal, orofacial, and limb defects. 19793345 2011
Entrez Id: 7405
Gene Symbol: UVRAG
UVRAG
0.030 GeneticVariation group BEFREE Mutations in the transcription factor p63 have been linked to several syndromes characterized by ectodermal, orofacial, and limb defects. 19793345 2011
Entrez Id: 8626
Gene Symbol: TP63
TP63
0.030 GeneticVariation group BEFREE Mutations in the transcription factor p63 have been linked to several syndromes characterized by ectodermal, orofacial, and limb defects. 19793345 2011
Entrez Id: 10970
Gene Symbol: CKAP4
CKAP4
0.030 GeneticVariation group BEFREE Mutations in the transcription factor p63 have been linked to several syndromes characterized by ectodermal, orofacial, and limb defects. 19793345 2011
Entrez Id: 5879
Gene Symbol: RAC1
RAC1
0.020 GeneticVariation group BEFREE This fetus is the third human case with limb defects and RAC1 deletion. 30193563 2019
Entrez Id: 57167
Gene Symbol: SALL4
SALL4
0.020 Biomarker group BEFREE A transcription factor called SALL4 could be the missing link between thalidomide and the limb defects caused by the drug. 30252647 2018
Entrez Id: 100188340
Gene Symbol: AOS
AOS
0.020 GeneticVariation group BEFREE Adams-Oliver syndrome (AOS, OMIM; 100300) is a rare genetic disease characterized by aplasia cutis congenita, terminal transverse limb defects and cutis marmorata with vascular anomalies such as congenital heart defects. 28446798 2017
Entrez Id: 25836
Gene Symbol: NIPBL
NIPBL
0.020 GeneticVariation group BEFREE Additionally, we found that individuals with mutations in NIPBL were most likely to have limb defects compared to mutations in other genes with nonsense, exonic deletion, and frameshift mutations being most prevalent in those with limb defects. 27120260 2016
Entrez Id: 727857
Gene Symbol: BHLHA9
BHLHA9
0.020 GeneticVariation group BEFREE Recently, the minimal critical region had been reduced, suggesting that BHLHA9 copy number gains are associated with this limb defect. 23790188 2014
Entrez Id: 100188340
Gene Symbol: AOS
AOS
0.020 Biomarker group BEFREE Adams-Oliver syndrome (AOS; OMIM 100300) typically comprises a combination of congenital scalp defects and terminal transverse limb defects. 24668619 2014
Entrez Id: 25836
Gene Symbol: NIPBL
NIPBL
0.020 GeneticVariation group BEFREE We demonstrate that prenatally-detected phenotypes of CdLS, particularly severe micrognathia and bilateral upper limb defects, are associated with an increased frequency of NIPBL mutations. 24218399 2014