Gene Disease Score gda Association Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 3119
Gene Symbol: HLA-DQB1
HLA-DQB1
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.110 GeneticVariation BEFREE Oropharyngeal cancer associations were limited to the human leukocyte antigen (HLA) region, and classical HLA allele imputation showed a protective association with the class II haplotype HLA-DRB1*1301-HLA-DQA1*0103-HLA-DQB1*0603 (odds ratio (OR) = 0.59, P = 2.7 × 10<sup>-9</sup>). 27749845

2016

Entrez Id: 125
Gene Symbol: ADH1B
ADH1B
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.110 Biomarker BEFREE Among moderate-to-heavy drinkers, men with the less-active ADH1B*1/*1 had a significantly higher risk of the cancers overall, of hypopharyngeal cancer, and of oral/oropharyngeal cancer (OR = 5.56, 7.21 and 4.24, respectively). 17071628

2007

Entrez Id: 7157
Gene Symbol: TP53
TP53
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.100 GeneticVariation BEFREE The findings suggest that MDM2 SNP309, A2164G, and p53 codon 72 SNPs may collectively contribute to non-oropharyngeal cancer risk and that MDM2 SNP309 individually or in combination with p53 codon 72 may accelerate the development of non-oropharyngeal cancer in women. 21656578

2011

Entrez Id: 115482713
Gene Symbol: H3P10
H3P10
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.100 Biomarker BEFREE We sought to investigate the pathology and rates of HPV head and neck oropharyngeal cancer in Japan via p16 immunohistochemistry at 2 institutions in Japan. 27913709

2017

Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.100 GeneticVariation BEFREE Recently, the eighth edition of the American Joint Committee on Cancer/Union for International Cancer Control (AJCC/UICC) tumor-node-metastasis (TNM) staging system for OPC (based on the p16INK4a (p16) status) was proposed and has been implemented. 30987261

2019

Entrez Id: 7157
Gene Symbol: TP53
TP53
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.100 GeneticVariation BEFREE Patients with p53 mutant OSCC had significantly worse overall survival (p=0.01). 26952933

2016

Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.100 Biomarker BEFREE For p16(INK4A), 85 of 200 (42.5%) patients were found to be p16 positive, including 75 of 131 (57%) with oropharyngeal cancer. 21467228

2011

Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.100 AlteredExpression BEFREE Impact of p16 expression in oropharyngeal cancer in the postoperative setting: the necessity of re-evaluating traditional risk stratification. 27474125

2016

Entrez Id: 115482713
Gene Symbol: H3P10
H3P10
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.100 Biomarker BEFREE HPV testing by GP5+/6+ PCR, In Situ Hybridisation (ISH) and p16 immunohistochemistry (IHC) was performed on 138 OPCs diagnosed in South Wales (UK) between 2001-06. 23634887

2013

Entrez Id: 115482713
Gene Symbol: H3P10
H3P10
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.100 Biomarker BEFREE The diagnosis of HPV-related oropharyngeal cancer in clinical practice is based on p16 immunohistochemistry and PCR detection of viral DNA (HPV-PCR). 25687724

2015

Entrez Id: 7157
Gene Symbol: TP53
TP53
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.100 AlteredExpression BEFREE Overexpression of p53 predicted a trend toward an improved prognosis, whereas no reduction in FHIT expression predicted a significantly poorer outcome in patients with advanced oropharyngeal cancer. 15239028

2005

Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.100 Biomarker BEFREE Among these biomarkers, p53 is the strongest prognostic marker in OPC and p53 in addition to p16 support the rationale to study of de-escalation strategy for OPC. 25380690

2014

Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.100 GeneticVariation BEFREE Patients with OPC with available p16 status and tobacco history were eligible. 30913305

2019

Entrez Id: 115482713
Gene Symbol: H3P10
H3P10
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.100 AlteredExpression BEFREE Combined analysis of HPV-DNA, p16 and EGFR expression to predict prognosis in oropharyngeal cancer. 17236202

2007

Entrez Id: 115482713
Gene Symbol: H3P10
H3P10
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.100 Biomarker BEFREE Our findings support the hypothesis that p16 has a similar prognostic role in both nonoropharyngeal and oropharyngeal cancer. 29878161

2018

Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.100 GeneticVariation BEFREE Overall, this study provides evidence of epigenetic changes to the downstream region of the CDKN2A locus in HPV+ oropharyngeal cancer that are associated with changes in expression of the coded protein products. 25619363

2015

Entrez Id: 115482713
Gene Symbol: H3P10
H3P10
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.100 GeneticVariation BEFREE Patients with OPC with available p16 status and tobacco history were eligible. 30913305

2019

Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.100 Biomarker BEFREE Population-based p16 and HPV positivity rates in oropharyngeal cancer in Southeast Scotland. 26152733

2015

Entrez Id: 7157
Gene Symbol: TP53
TP53
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.100 GeneticVariation BEFREE Human papillomavirus tumor-infiltrating T-regulatory lymphocytes and P53 codon 72 polymorphisms correlate with clinical staging and prognosis of oropharyngeal cancer. 23686119

2013

Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.100 Biomarker BEFREE Our findings show that p16 IHC alone has potential as a prognostic test for oropharyngeal cancer survival, but combined p16/HPV testing is necessary to identify HPV-associated nonoropharyngeal HNSCC with better prognosis. 24706381

2014

Entrez Id: 115482713
Gene Symbol: H3P10
H3P10
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.100 AlteredExpression BEFREE Oropharynx cancer with significant p16 expression showed an increased overall survival and elevated T- and B-lymphocyte infiltration, which suggests a prognostic relevance of immune cell infiltration. 29493423

2018

Entrez Id: 115482713
Gene Symbol: H3P10
H3P10
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.100 AlteredExpression BEFREE Increased incidence of oropharyngeal cancer and p16 expression. 21542673

2011

Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.100 Biomarker BEFREE Significant correlations were confirmed between p16 positivity and oropharyngeal cancer, MMP1 and p16 positivity, and recurrence and smoking. 25503184

2014

Entrez Id: 7157
Gene Symbol: TP53
TP53
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.100 Biomarker BEFREE In this study, we investigated the expression and function of p53R2 and hRRM2 after UV treatment in human prostate cancer PC3 cells, which possess mutant p53 with a truncated COOH-terminal, and in human oropharyngeal cancer KB cells, which possess wild-type p53. p53R2 (analyzed by Western blot and standardized relative to Coomassie Blue-stained band) was down-regulated in PC3 cells and up-regulated in KB cells after UV exposure. 14583450

2003

Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.100 Biomarker BEFREE Relationship Between p16 Expression and Prognosis in Patients with Oropharyngeal Cancer Undergoing Surgery. 29936482

2018