Gene Disease Score gda Association Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 3123
Gene Symbol: HLA-DRB1
HLA-DRB1
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.020 GeneticVariation BEFREE Oropharyngeal cancer associations were limited to the human leukocyte antigen (HLA) region, and classical HLA allele imputation showed a protective association with the class II haplotype HLA-DRB1*1301-HLA-DQA1*0103-HLA-DQB1*0603 (odds ratio (OR) = 0.59, P = 2.7 × 10<sup>-9</sup>). 27749845

2016

Entrez Id: 3117
Gene Symbol: HLA-DQA1
HLA-DQA1
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.010 GeneticVariation BEFREE Oropharyngeal cancer associations were limited to the human leukocyte antigen (HLA) region, and classical HLA allele imputation showed a protective association with the class II haplotype HLA-DRB1*1301-HLA-DQA1*0103-HLA-DQB1*0603 (odds ratio (OR) = 0.59, P = 2.7 × 10<sup>-9</sup>). 27749845

2016

Entrez Id: 3119
Gene Symbol: HLA-DQB1
HLA-DQB1
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.110 GeneticVariation BEFREE Oropharyngeal cancer associations were limited to the human leukocyte antigen (HLA) region, and classical HLA allele imputation showed a protective association with the class II haplotype HLA-DRB1*1301-HLA-DQA1*0103-HLA-DQB1*0603 (odds ratio (OR) = 0.59, P = 2.7 × 10<sup>-9</sup>). 27749845

2016

Entrez Id: 115482713
Gene Symbol: H3P10
H3P10
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.100 AlteredExpression BEFREE Oropharynx cancer with significant p16 expression showed an increased overall survival and elevated T- and B-lymphocyte infiltration, which suggests a prognostic relevance of immune cell infiltration. 29493423

2018

Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.100 AlteredExpression BEFREE Oropharynx cancer with significant p16 expression showed an increased overall survival and elevated T- and B-lymphocyte infiltration, which suggests a prognostic relevance of immune cell infiltration. 29493423

2018

Entrez Id: 9997
Gene Symbol: SCO2
SCO2
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.010 AlteredExpression BEFREE Thymidine phosphorylase mRNA level predicts survival of patients with advanced oropharyngeal cancer. 17364369

2007

Entrez Id: 1890
Gene Symbol: TYMP
TYMP
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.010 AlteredExpression BEFREE Thymidine phosphorylase mRNA level predicts survival of patients with advanced oropharyngeal cancer. 17364369

2007

Entrez Id: 596
Gene Symbol: BCL2
BCL2
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.020 Biomarker BEFREE Bcl2 and human papilloma virus 16 as predictors of outcome following concurrent chemoradiation for advanced oropharyngeal cancer. 20233885

2010

Entrez Id: 3558
Gene Symbol: IL2
IL2
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.010 GeneticVariation BEFREE IL-2 -384 G/T was associated with better survival in oral cavity/oropharynx cancer (HR = 0.80; 95%CI = 0.45-1.42) and hypopharynx cancer (HR = 0.68; 95%CI = 0.21-2.20), but an inverse relationship was observed for larynx cancer. 21845339

2011

Entrez Id: 137492
Gene Symbol: VPS37A
VPS37A
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.010 AlteredExpression BEFREE HCRP1 expression status is a significant prognostic marker in oral and oropharyngeal cancer. 22891969

2013

Entrez Id: 4851
Gene Symbol: NOTCH1
NOTCH1
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.010 Biomarker BEFREE Notch1 Overexpression Correlates to Improved Survival in Cancer of the Oropharynx. 28195818

2017

Entrez Id: 5290
Gene Symbol: PIK3CA
PIK3CA
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.020 GeneticVariation BEFREE PI3K pathway alterations were associated with improved outcomes among metastatic HPV+ OPC patients. 30185662

2018

Entrez Id: 5294
Gene Symbol: PIK3CG
PIK3CG
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.010 GeneticVariation BEFREE PI3K pathway alterations were associated with improved outcomes among metastatic HPV+ OPC patients. 30185662

2018

Entrez Id: 5293
Gene Symbol: PIK3CD
PIK3CD
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.010 GeneticVariation BEFREE PI3K pathway alterations were associated with improved outcomes among metastatic HPV+ OPC patients. 30185662

2018

Entrez Id: 5291
Gene Symbol: PIK3CB
PIK3CB
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.010 GeneticVariation BEFREE PI3K pathway alterations were associated with improved outcomes among metastatic HPV+ OPC patients. 30185662

2018

Entrez Id: 1401
Gene Symbol: CRP
CRP
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.010 Biomarker BEFREE C-reactive Protein in HPV-Positive and HPV-Negative Oropharyngeal Cancer. 30226795

2019

Entrez Id: 841
Gene Symbol: CASP8
CASP8
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.010 GeneticVariation BEFREE CASP8 (rs3834129) and CASP3 (rs4647601) polymorphisms in oropharynx cancer risk, tumor cell differentiation, and prognosis in a cohort of the Brazilian population. 31587185

2019

Entrez Id: 7040
Gene Symbol: TGFB1
TGFB1
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.020 GeneticVariation BEFREE A TGF-β1 genetic variant at the miRNA187 binding site significantly modifies risk of HPV16-associated oropharyngeal cancer. 29663347

2018

Entrez Id: 406906
Gene Symbol: MIR122
MIR122
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.030 AlteredExpression BEFREE A differentiated expression of miR-122-5p between oral cancer and oropharynx cancer (AUC of 0.96 p = 0.01) was found: miR-124-3p between larynx and pharynx (AUC = 0.97, p < 0.01) and miR-146a-5p between larynx, oropharynx, and oral cavity (AUC = 0.96, p = 0.01). 30584540

2018

Entrez Id: 406938
Gene Symbol: MIR146A
MIR146A
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.010 Biomarker BEFREE A differentiated expression of miR-122-5p between oral cancer and oropharynx cancer (AUC of 0.96 p = 0.01) was found: miR-124-3p between larynx and pharynx (AUC = 0.97, p < 0.01) and miR-146a-5p between larynx, oropharynx, and oral cavity (AUC = 0.96, p = 0.01). 30584540

2018

Entrez Id: 406906
Gene Symbol: MIR122
MIR122
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.030 GeneticVariation BEFREE A functional variant at miRNA-122 binding site in IL-1α 3' UTR predicts risk and HPV-positive tumours of oropharyngeal cancer. 25981582

2015

Entrez Id: 406906
Gene Symbol: MIR122
MIR122
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.030 GeneticVariation BEFREE A functional variant at miRNA-122 binding site in IL-1a 3' UTR predicts risk of recurrence in patients with oropharyngeal cancer. 27121322

2016

Entrez Id: 3552
Gene Symbol: IL1A
IL1A
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.030 GeneticVariation BEFREE A functional variant at miRNA-122 binding site in IL-1α 3' UTR predicts risk and HPV-positive tumours of oropharyngeal cancer. 25981582

2015

Entrez Id: 3552
Gene Symbol: IL1A
IL1A
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.030 GeneticVariation BEFREE A functional variant at miRNA-122 binding site in IL-1a 3' UTR predicts risk of recurrence in patients with oropharyngeal cancer. 27121322

2016

Entrez Id: 4194
Gene Symbol: MDM4
MDM4
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.020 GeneticVariation BEFREE A genetic variant within MDM4 3'UTR miRNA binding site is associated with HPV16-positive tumors and survival of oropharyngeal cancer. 31513313

2019