Gene Disease Score gda Association Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 7157
Gene Symbol: TP53
TP53
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.100 AlteredExpression BEFREE Correlation between p53 gene expression and tumor-cell proliferation in oropharyngeal cancer. 8181849

1994

Entrez Id: 126
Gene Symbol: ADH1C
ADH1C
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.010 GeneticVariation BEFREE In addition, the oropharyngeal cancer patients had excess frequencies of both GSTmu(-) (62%) and ADH(3)1/ADH(3)1 (43%) relative to the control group, but these excess frequencies were not statistically significant. 9050916

1997

Entrez Id: 128
Gene Symbol: ADH5
ADH5
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.010 GeneticVariation BEFREE In addition, the oropharyngeal cancer patients had excess frequencies of both GSTmu(-) (62%) and ADH(3)1/ADH(3)1 (43%) relative to the control group, but these excess frequencies were not statistically significant. 9050916

1997

Entrez Id: 2947
Gene Symbol: GSTM3
GSTM3
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.010 GeneticVariation BEFREE In contrast, neither the GSTM1 null genotype nor the GSTM3 AA genotype was associated with oropharyngeal cancer risk (OR 0.9, 95% CI 0.5-1.5 and OR = 1.3, 95% CI 0.7-2.3, respectively). 10077151

1999

Entrez Id: 2944
Gene Symbol: GSTM1
GSTM1
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.010 GeneticVariation BEFREE In contrast, neither the GSTM1 null genotype nor the GSTM3 AA genotype was associated with oropharyngeal cancer risk (OR 0.9, 95% CI 0.5-1.5 and OR = 1.3, 95% CI 0.7-2.3, respectively). 10077151

1999

Entrez Id: 7157
Gene Symbol: TP53
TP53
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.100 Biomarker BEFREE In this study, we investigated the expression and function of p53R2 and hRRM2 after UV treatment in human prostate cancer PC3 cells, which possess mutant p53 with a truncated COOH-terminal, and in human oropharyngeal cancer KB cells, which possess wild-type p53. p53R2 (analyzed by Western blot and standardized relative to Coomassie Blue-stained band) was down-regulated in PC3 cells and up-regulated in KB cells after UV exposure. 14583450

2003

Entrez Id: 50484
Gene Symbol: RRM2B
RRM2B
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.010 Biomarker BEFREE In this study, we investigated the expression and function of p53R2 and hRRM2 after UV treatment in human prostate cancer PC3 cells, which possess mutant p53 with a truncated COOH-terminal, and in human oropharyngeal cancer KB cells, which possess wild-type p53. p53R2 (analyzed by Western blot and standardized relative to Coomassie Blue-stained band) was down-regulated in PC3 cells and up-regulated in KB cells after UV exposure. 14583450

2003

Entrez Id: 7157
Gene Symbol: TP53
TP53
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.100 AlteredExpression BEFREE Overexpression of p53 predicted a trend toward an improved prognosis, whereas no reduction in FHIT expression predicted a significantly poorer outcome in patients with advanced oropharyngeal cancer. 15239028

2005

Entrez Id: 125
Gene Symbol: ADH1B
ADH1B
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.110 Biomarker BEFREE Among moderate-to-heavy drinkers, men with the less-active ADH1B*1/*1 had a significantly higher risk of the cancers overall, of hypopharyngeal cancer, and of oral/oropharyngeal cancer (OR = 5.56, 7.21 and 4.24, respectively). 17071628

2007

Entrez Id: 115482713
Gene Symbol: H3P10
H3P10
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.100 AlteredExpression BEFREE Combined analysis of HPV-DNA, p16 and EGFR expression to predict prognosis in oropharyngeal cancer. 17236202

2007

Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.100 AlteredExpression BEFREE Combined analysis of HPV-DNA, p16 and EGFR expression to predict prognosis in oropharyngeal cancer. 17236202

2007

Entrez Id: 1956
Gene Symbol: EGFR
EGFR
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.050 AlteredExpression BEFREE Combined analysis of HPV-DNA, p16 and EGFR expression to predict prognosis in oropharyngeal cancer. 17236202

2007

Entrez Id: 9997
Gene Symbol: SCO2
SCO2
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.010 AlteredExpression BEFREE Thymidine phosphorylase mRNA level predicts survival of patients with advanced oropharyngeal cancer. 17364369

2007

Entrez Id: 1890
Gene Symbol: TYMP
TYMP
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.010 AlteredExpression BEFREE Thymidine phosphorylase mRNA level predicts survival of patients with advanced oropharyngeal cancer. 17364369

2007

Entrez Id: 1956
Gene Symbol: EGFR
EGFR
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.050 Biomarker BEFREE Smoking cessation and strategies to target EGFR and Bcl-xL are important adjuncts to the treatment of oropharyngeal cancer. 18474878

2008

Entrez Id: 252969
Gene Symbol: NEIL2
NEIL2
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.010 GeneticVariation BEFREE Polymorphisms of the NEIL2 gene may be markers for risk and progression of SCCOOP, particularly in patients with oropharyngeal cancer. 18594018

2008

Entrez Id: 83478
Gene Symbol: ARHGAP24
ARHGAP24
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.020 GeneticVariation BEFREE The p73 polymorphism was associated with HPV-16 status in SCCHN and may serve as a marker of positive HPV-16 tumor status in patients with SCCHN, particularly those with oropharyngeal cancer. 19197996

2009

Entrez Id: 7161
Gene Symbol: TP73
TP73
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.020 GeneticVariation BEFREE The p73 polymorphism was associated with HPV-16 status in SCCHN and may serve as a marker of positive HPV-16 tumor status in patients with SCCHN, particularly those with oropharyngeal cancer. 19197996

2009

Entrez Id: 1832
Gene Symbol: DSP
DSP
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.010 AlteredExpression BEFREE Altered desmoplakin expression at transcriptional and protein levels provides prognostic information in human oropharyngeal cancer. 19386346

2009

Entrez Id: 3586
Gene Symbol: IL10
IL10
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.010 GeneticVariation BEFREE After adjusting for age, education, ethnicity, gender, and tobacco smoking, IL10 rs1800871 was inversely associated with oropharyngeal cancer (CT+TT vs. CC adjusted odds ratio [aOR]: 0.69, 95% confidence interval [CI]: 0.50-0.95), and was positively associated with lung cancer among never smokers (TT vs. CT+CC aOR: 2.5, 95% CI: 1.3-5.1) and inversely with oropharyngeal cancer among ever smokers (CT+TT vs. CC aOR: 0.63, 95% CI: 0.41-0.95). 20112337

2010

Entrez Id: 7040
Gene Symbol: TGFB1
TGFB1
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.020 GeneticVariation BEFREE Association of TGF-beta1 genetic variants with HPV16-positive oropharyngeal cancer. 20179236

2010

Entrez Id: 4255
Gene Symbol: MGMT
MGMT
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.010 GeneticVariation BEFREE In conclusion, our results suggest that any one of MGMT variants may not have a substantial effect on SCCHN risk, but a joint effect of several MGMT variants may contribute to risk and progression of SCCHN, particularly for oropharyngeal cancer, in non-Hispanic whites. 20206583

2010

Entrez Id: 1499
Gene Symbol: CTNNB1
CTNNB1
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.010 Biomarker BEFREE To determine whether Siah-1 is important for the proteasomal degradation of beta-catenin in HPV16-positive oropharyngeal cancer cells, we introduced a Siah-1 expression vector into 147T and 090 cells and found substantial reduction of endogenous beta-catenin in these cells. 20215420

2010

Entrez Id: 6477
Gene Symbol: SIAH1
SIAH1
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.010 Biomarker BEFREE To determine whether Siah-1 is important for the proteasomal degradation of beta-catenin in HPV16-positive oropharyngeal cancer cells, we introduced a Siah-1 expression vector into 147T and 090 cells and found substantial reduction of endogenous beta-catenin in these cells. 20215420

2010

Entrez Id: 596
Gene Symbol: BCL2
BCL2
CUI: C0153382
Disease: Malignant neoplasm of oropharynx
Malignant neoplasm of oropharynx
0.020 Biomarker BEFREE Bcl2 and human papilloma virus 16 as predictors of outcome following concurrent chemoradiation for advanced oropharyngeal cancer. 20233885

2010