Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs3782025
rs3782025
0.010 GeneticVariation BEFREE Subsequent analysis of these two interaction models revealed an OR of 2.71 and 2.80, respectively, for AD (P < 0.001) in carriers of genotype combinations 5'-HTTLPR:LL/LS(SLC6A4)-rs1042173:TT/TG(SLC6A4)-rs1176744:AC(HTR3B)-rs3782025:AG(HTR3B) and 5'-HTTLPR:LL/LS(SLC6A4)-rs10160548:GT/TT(HTR3A)-rs1176744:AC(HTR3B)-rs3782025:AG(HTR3B). 23757001

2013

dbSNP: rs4935356
rs4935356
0.010 GeneticVariation BEFREE The best novel signal was SNP rs2239803 associated with AD in both samples (p = 0.000817 for the COGA sample and p = 0.0026 for the SAGE sample, respectively) while one flanking SNP rs4935356 also showed strong association in both samples (p = 0.00219 and 0.0026 for the COGA and SAGE samples, respectively). 22890421

2013

dbSNP: rs5916144
rs5916144
0.010 GeneticVariation BEFREE We found that, after experiment-wide correction, two SNPs on the X chromosome were associated significantly with alcohol dependence in European-American men (P = 1.0 × 10 for rs5916144 and P = 5.5 × 10 for rs5961794 at 3' UTR of NLGN4X), but not in the women. 23907288

2013

dbSNP: rs5961794
rs5961794
0.010 GeneticVariation BEFREE We found that, after experiment-wide correction, two SNPs on the X chromosome were associated significantly with alcohol dependence in European-American men (P = 1.0 × 10 for rs5916144 and P = 5.5 × 10 for rs5961794 at 3' UTR of NLGN4X), but not in the women. 23907288

2013

dbSNP: rs7204609
rs7204609
FTO
0.010 GeneticVariation BEFREE Two SNPs (rs12597786 and rs7204609) associated with AD in the SAGE sample (p = 0.017 and 0.034, respectively) were replicated in the COGA sample (p = 0.017 and 0.014, respectively). 23771786

2013

dbSNP: rs8062891
rs8062891
0.010 GeneticVariation BEFREE Through meta-analysis of two samples using PLINK, the top three SNPs associated with AD were rs8062891, rs12597786, and rs7204609 (p = 0.00064, 0.00076 and 0.0011, respectively). 23771786

2013

dbSNP: rs900418273
rs900418273
0.010 GeneticVariation BEFREE COMT Val158Met modulates the effect of childhood adverse experiences on the risk of alcohol dependence. 22509987

2013

dbSNP: rs10009145
rs10009145
0.010 GeneticVariation BEFREE Haplotype ATAAAT, which contained the minor allele of rs10009145 and the major allele of rs7689753, increased the risk of alcohol dependence, whereas haplotype GGGGAT, bearing the major allele of rs10009145 and the minor allele of rs7689753, protected against it. 22044940

2012

dbSNP: rs1034866440
rs1034866440
AR
0.010 GeneticVariation BEFREE In this study, we explored whether functionally relevant genetic polymorphisms in SRD5A2 (V89L, A49T, [TA](n)) are linked to alcohol addiction and craving. 22707254

2012

dbSNP: rs11568817
rs11568817
0.010 GeneticVariation BEFREE The results suggest an association between a functional variant of the gene (rs11568817) and alcohol dependence (p=0.001). 22005095

2012

dbSNP: rs130058
rs130058
0.010 GeneticVariation BEFREE The aim of this study is to investigate the role of the most relevant variants (rs11568817, rs130058, rs6296 and rs13212041) of the HTR1B gene in the susceptibility to alcohol dependence. 22005095

2012

dbSNP: rs13212041
rs13212041
0.010 GeneticVariation BEFREE The aim of this study is to investigate the role of the most relevant variants (rs11568817, rs130058, rs6296 and rs13212041) of the HTR1B gene in the susceptibility to alcohol dependence. 22005095

2012

dbSNP: rs137852569
rs137852569
AR
0.010 GeneticVariation BEFREE In this study, we explored whether functionally relevant genetic polymorphisms in SRD5A2 (V89L, A49T, [TA](n)) are linked to alcohol addiction and craving. 22707254

2012

dbSNP: rs1800532
rs1800532
0.010 GeneticVariation BEFREE Our aim was to assess the association of TPH1 A218C polymorphism (rs1800532) with mood disorders, including major depressive disorder and bipolar disorder, and alcohol dependence by using meta-analysis. 21601290

2012

dbSNP: rs1800564
rs1800564
LEP
0.010 GeneticVariation BEFREE In this study, we explored whether functionally relevant genetic polymorphisms in SRD5A2 (V89L, A49T, [TA](n)) are linked to alcohol addiction and craving. 22707254

2012

dbSNP: rs2273816
rs2273816
0.010 GeneticVariation BEFREE One SNP rs2273816 was found to be significantly associated with schizophrenia, opiate dependence and alcohol dependence at the genotype and allele level. 22960338

2012

dbSNP: rs279826
rs279826
0.010 GeneticVariation BEFREE In a sample of 173 families (449 subjects), 129 of whom had at least one member diagnosed with alcohol dependence or abuse, carriers for the G allele in two single-nucleotide polymorphisms (SNPs) and haplotypes were more likely to have alcohol dependence symptoms (rs279858, P=0.01; rs279826, P=0.05; haplotype, P=0.02) and higher NEO Personality Inventory-Revised (NEO-PI-R) Impulsiveness scores (rs279858, P=0.016; rs279826, P=0.012; haplotype, P=0.032) with a stronger effect in women (rs279858, P=0.011; rs279826, P=0.002; haplotype, P=0.006), all P-values are corrected for family history and age. 21483437

2012

dbSNP: rs36020
rs36020
0.010 GeneticVariation BEFREE Two single nucleotide polymorphisms (SNP) (rs36020 and rs36029) in SLC6A2 were significantly associated with alcoholism [false discovery rate corrected P-value (FDR) P = 0.007]. 21070505

2012

dbSNP: rs36029
rs36029
0.010 GeneticVariation BEFREE Two single nucleotide polymorphisms (SNP) (rs36020 and rs36029) in SLC6A2 were significantly associated with alcoholism [false discovery rate corrected P-value (FDR) P = 0.007]. 21070505

2012

dbSNP: rs371308207
rs371308207
C1D
0.010 GeneticVariation BEFREE Our results show statistically significant associations between SNP in exon 8 A/G in the DRD2 gene and alcohol withdrawal syndrome with seizures, and between SNP in promoter -141 C I/D in the DRD2 gene and early onset of alcohol dependence (AD). 23238469

2012

dbSNP: rs521674
rs521674
0.010 GeneticVariation BEFREE Two SNPs in ADRA2A (rs521674 and rs602618) were associated with a positive family history of alcoholism (FDR P ≤ 0.05). 21070505

2012

dbSNP: rs523349
rs523349
0.010 GeneticVariation BEFREE In this study, we explored whether functionally relevant genetic polymorphisms in SRD5A2 (V89L, A49T, [TA](n)) are linked to alcohol addiction and craving. 22707254

2012

dbSNP: rs602618
rs602618
0.010 GeneticVariation BEFREE Two SNPs in ADRA2A (rs521674 and rs602618) were associated with a positive family history of alcoholism (FDR P ≤ 0.05). 21070505

2012

dbSNP: rs727532
rs727532
0.010 GeneticVariation BEFREE Especially, SNP rs727532 within ABLIM1 gene at 10q25 showed the most significant association (p = 6.4 × 10(-5)) in the multivariate test and strong associations with NS, HA, RD, and AD (p = 4.48 × 10(-4), 1.2 × 10(-5), 5.6 × 10(-5), 3.12 × 10(-4), respectively) in the COGA sample. 21547531

2012

dbSNP: rs738409
rs738409
0.010 GeneticVariation BEFREE Patatin-like phospholipase domain-containing 3 (PNPLA3) I148M (rs738409) genetic variant has been associated with hepatocellular carcinoma (HCC) in individuals with chronic alcohol abuse or hepatic viral infection. 22704398

2012