Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs6831280
rs6831280
0.010 GeneticVariation BEFREE <i>IDUA</i> rs6831280 is associated with BMDs at L2-4 and TH in the elderly Chinese population with SOP and may serve as a marker for the genetic susceptibility to osteoporotic fractures. 31275456

2019

dbSNP: rs3736228
rs3736228
0.010 GeneticVariation BEFREE A non-synonymous SNP in the LRP5 gene was associated with decreased bone mineral density (rs3736228, p=6.3x10(-12) for lumbar spine and p=1.9x10(-4) for femoral neck) and an increased risk of both osteoporotic fractures (odds ratio [OR] 1.3, 95% CI 1.09-1.52, p=0.002) and osteoporosis (OR 1.3, 1.08-1.63, p=0.008). 18455228

2008

dbSNP: rs1107748
rs1107748
0.010 GeneticVariation BEFREE A significant gene-gene interaction for osteoporotic fracture involving rs1107748 i</span>n SOST and rs6469804 in OPG gene was identified from generalized multifactor dimensionality reduction analysis. 20554715

2010

dbSNP: rs6469804
rs6469804
0.020 GeneticVariation BEFREE A significant gene-gene interaction for osteoporotic fracture involving rs1107748 in SOST and rs6469804 in OPG gene was identified from generalized multifactor dimensionality reduction analysis. 20554715

2010

dbSNP: rs6469804
rs6469804
0.020 GeneticVariation BEFREE Among the nine SNPs genotyped, rs6469804 and rs2073618 showed significant associations with both BMD and osteoporotic fractures, while rs3102735 was only associated with BMD in our samples (P < 0.05). 28496203

2017

dbSNP: rs2073618
rs2073618
0.020 GeneticVariation BEFREE Among the nine SNPs genotyped, rs6469804 and rs2073618 showed significant associations with both BMD and osteoporotic fractures, while rs3102735 was only associated with BMD in our samples (P < 0.05). 28496203

2017

dbSNP: rs3102735
rs3102735
0.010 GeneticVariation BEFREE Among the nine SNPs genotyped, rs6469804 and rs2073618 showed significant associations with both BMD and osteoporotic fractures, while rs3102735 was only associated with BMD in our samples (P < 0.05). 28496203

2017

dbSNP: rs758488397
rs758488397
0.010 GeneticVariation BEFREE Both variants associate with low BMD and with osteoporotic fractures. p.Gly496Ala (frequency of 0.105%) shows the strongest association with low BMD at the spine (p = 1.8 × 10(-7) , odds ratio [OR] = 4.61 [95% confidence interval (CI) 2.59, 8.18]), whereas p.Gly703Ser (frequency of 0.050%) is most strongly associated with low BMD at the hip (p = 1.9 × 10(-8) , OR = 9.34 [95% CI 4.28, 20.3]). 26235824

2016

dbSNP: rs4680
rs4680
0.010 GeneticVariation BEFREE Catechol-O-methyltransferase (COMT) Val158Met polymorphism and risk of osteoporotic fracture. 21691708

2012

dbSNP: rs3087456
rs3087456
0.010 GeneticVariation BEFREE Despite increasing bone loss, the rs3087456(G) allele was protective against incident fracture overall (p = 0.002), osteoporotic fracture and hip fracture. 23133532

2012

dbSNP: rs1982073
rs1982073
0.010 GeneticVariation BEFREE Disease-stratified results yielded that rs1982073 C>T may increase the risk of fracture, OP, and OA under the allele model, but was only significantly related to OP under the dominant model. 25501632

2016

dbSNP: rs4342521
rs4342521
0.010 GeneticVariation BEFREE Eight selected variants were tested for association in the complete cohort and 2 of them (rs4342521 and rs10085588) were found significantly associated with lumbar spine BMD and nominally associated with osteoporotic fracture. cis-eQTL analyses of these 2 SNPs, together with SNP rs4727338 (GWAS lead SNP in Estrada et al., Nat Genet. 30878523

2019

dbSNP: rs10085588
rs10085588
0.010 GeneticVariation BEFREE Eight selected variants were tested for association in the complete cohort and 2 of them (rs4342521 and rs10085588) were found significantly associated with lumbar spine BMD and nominally associated with osteoporotic fracture. cis-eQTL analyses of these 2 SNPs, together with SNP rs4727338 (GWAS lead SNP in Estrada et al., Nat Genet. 30878523

2019

dbSNP: rs11898505
rs11898505
0.020 GeneticVariation BEFREE Genetic (rs11898505) and non-genetic factors (age, number of falls in a year and L1-4 BMD) could work in concert to contribute to the risk of osteoporotic fractures. 22798246

2013

dbSNP: rs784288
rs784288
0.010 GeneticVariation BEFREE In a combined meta-analysis of a discovery cohort (288 cases and 1139 controls), three hospital based sets in replication stage I (462 cases and 1745 controls), and an independent ethnic group in replication stage II (369 cases and 560 for controls), we identified a new locus associated with OF (rs784288 in the MECOM gene) that showed genome-wide significance (p=3.59×10(-8); OR 1.39). 23349225

2013

dbSNP: rs1217691063
rs1217691063
0.030 GeneticVariation BEFREE In conclusion, the C677T polymorphism of the MTHFR gene does not appear to be associated with the overall risk of osteoporotic fractures. 17712717

2007

dbSNP: rs1217691063
rs1217691063
0.030 GeneticVariation BEFREE In conclusion, we have demonstrated that the rare TT genotype of the C677T polymorphism in the MTHFR gene is associated with increased risk of osteoporotic fractures in women and a weak predictor of lumbar spine BMD. 15300362

2005

dbSNP: rs7570532
rs7570532
0.010 GeneticVariation BEFREE In the DOPS, individuals homozygous for the variant allele of the MSTN SNP rs7570532 had an increased risk of any osteoporotic fracture, with an HR of 1.82 (95 % CI 1.15-2.90, p = 0.01), and of nonvertebral osteoporotic fracture, with an HR of 2.02 (95 % CI 1.20-3.41, p = 0.01). 23370486

2013

dbSNP: rs1217691063
rs1217691063
0.030 GeneticVariation BEFREE In the subgroup analysis by ethnicity, the results also showed no significant association between MTHFR C677T poly</span>morphism and susceptibility to osteoporotic fracture in postmenopausal women in both Caucasian and Asian populations. 25222234

2014

dbSNP: rs270611
rs270611
0.010 GeneticVariation BEFREE Our study provides supportive evidence for the contribution of <i>PDLIM4</i> gene polymorphisms to the susceptibility to osteoporotic fracture and suggests that rs270611 and rs3900945 are genetic risk factors, while rs366512 might be a genetic protective factor against osteoporotic fracture in elderly Han individuals. 30578378

2019

dbSNP: rs3900945
rs3900945
0.010 GeneticVariation BEFREE Our study provides supportive evidence for the contribution of <i>PDLIM4</i> gene polymorphisms to the susceptibility to osteoporotic fracture and suggests that rs270611 and rs3900945 are genetic risk factors, while rs366512 might be a genetic protective factor against osteoporotic fracture in elderly Han individuals. 30578378

2019

dbSNP: rs366512
rs366512
0.010 GeneticVariation BEFREE Our study provides supportive evidence for the contribution of <i>PDLIM4</i> gene polymorphisms to the susceptibility to osteoporotic fracture and suggests that rs270611 and rs3900945 are genetic risk factors, while rs366512 might be a genetic protective factor against osteoporotic fracture in elderly Han individuals. 30578378

2019

dbSNP: rs1800012
rs1800012
0.010 GeneticVariation BEFREE Over the past two decades, a low frequency variant (rs1800012) within the first intron of the type I collagen alpha 1 (COLIA1) gene has been implicated in lower areal BMD (aBMD) and increased risk of osteoporotic fracture. 30711642

2019

dbSNP: rs11898505
rs11898505
0.020 GeneticVariation BEFREE SPTBN1 (rs11898505) and SOST (rs1107748) were associated with osteoporotic fracture. 20554715

2010

dbSNP: rs3917
rs3917
0.010 GeneticVariation BEFREE The findings showed rs3917 polymorphism interfered with the interaction between COL1A2 mRNA and miR-382, and minor allele is associated with a reduced risk of osteoporotic fracture. 30825231

2019